LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa10g1652	ATGGGGCTTCAGCTGATTTTTCTTCTGGTTAAGCTACATTTAGTTTTCTGTGCTCCTCAGCTTCGTGAATATACAGCCACTAATCTGCACAATTCCAGAAGTCATTCAAGCATCGCTATCCCACCATCCCAGTCAGCCTCTAAAGTTCCTGCATGTACTGCATTTCCACCTTCTAAGCAATTCGCTCGAGCTCGAGCTCATGTGAAGGAATGGACACATGATTCTGTAAATTCTCCATTATCACATCATAAGCATCACCATTTCAGAAGAAAGTCCAGCAACCCAACACCTCCTTACAACCATCAAGGTCCCTCGGTTTTTCAATCACGGCCTCCTTTCTCTTCACCAATGAGCCGGGATTTGCTTGCACCTGCATCATCACCATCACCAGCAGTTATATCAGGCCACTTGAATGTGTTTTCTCCTTCTCCTAGAGTTTCACCTCAAGATTCACCATTGAAGAAGATGAAGACTCCATCACCGTCACATGTTTTAGCTTTGCCACCTCCACCTCCTAATACAGAATGCATGTCAGTGAGCTGCTCAGAGCCCTTTACTTATACACCTCCTGGATCACCTTGTGGCTGTGTATGGCCGCTCCAAGTTAAGCTCCGACTCAGCATTGCAATATACAGGTTTTTTCCTCTGGTTTTGGAGTTAGCTGAGGAAATTGCAGACCGTGTTTTGCTGAATCGTAGCCAAGTTCGCATTGTGGGAGCTGATGCATTTAATCACCAACTAGAGAAAACCACTGTTCTCATAAACTTAGTACCTAAAGGAGTTAAATTTGATGATGCAACAGCATTTTTAATATATAAGAAATTCTGGTACAGGGAGATTCTCTCCAATGCTTCCCTCTTTGGTGCCTATAAAGTTCTCTATGTTCATTATCCAGGTCTTCCCCCATCTCCACCTTCGACTCCCTCTAGCATTTCCGGTATGGATGATGGGCCATACCCTGGTTATAACAATAATGGAACACTAATTAAACCTTTAGGAGTAGATTTAGATGTGCCTATGAAGAACAAACAAGGGAATGGTAGAGGCATGATTATAATGATCGCATTGTCATGTTTTACTGTTTCTGTTCTATTCATTGGGATTGCCTGGCTTTTTCTGCTGAAATGTGGCTATTGTGTTCAAGATCCTGAACAATTCCCAGATGCTTCTATCCTGTCATCTTCAAAACCATCAGGGGCTGTCAGGTCATTGACATATGGGAGCATGCCGGACTCTAGATCGATGTCCTTCAGCTCTGGAACAATAATATATACAGGATCTGCTAGGACTTTCACTTTGGATGACATAGAGAAAGCAACAAACAACTTCGATGCTTCGAGAATAGTCGGTGAAGGAGGCTTTGGGCTTGTGTATAAAGGTGTTCTCCATGATGGGAGAGATGTTGCTGTGAAGATTCTGAAAAGATATGATCAGCACGGTGGCCGGGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTTTGCACCACAGAAACTTAGTGAAACTGATAGGCATATGCATGGAGAATCAGACTCGATGCTTAGTCTATGAGCTTATCCCTAACGGAAGTGTGGAATCCCACTTGCATGGTGCTGACAAGAAAACGAGTCCACTTGATTGGAATGCAAGGATGAAGATCGCGCTCGGTGCAGCTCGGGGATTGGCATATCTGCATGAAGATTCAAATCCCTGTGTTATACATAGGGACTTCAAGTCTAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTTGCAGATTTTGGATTGGCTAGGACAGCACTGGATGAAGGAAACAGGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCTCCTGAGTATGCAATGACTGGTCATCTTCTCGTCAAAAGTGATGTTTACAGCTACGGGGTTGTACTCCTTGAGCTCCTAACTGGAAGGAAGCCCGTGGATTTTTCACAACCACCGGGACAAGAAAACCTTGCGGCTTGGGTTCGTCCACTTCTCACAAGCAAAGAGGGTTTACAGACAATCATAGATCCGGCTATAGAGGCCAATGTTTCTTCTGACACTCTGGTAAAAGTTGCAGCAATTGCATCAATGTGTGTGCAACCAGAGGTCTCTCAACGCCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTTTGCTGCGAGTTTGACGATACAAGCATTATAAGATCCGGAAGCTTCCATGAAGAGAATCTTCCAACTGATAGACATGGGGAATTTTCTAGAATTTCAGGTGAGATAATGGATTTTCAAGCATTAACAGAAACACACTTGCTCAGTACATCATCAGGCCAGGAATTTGAGTCTTTCAGAAGGCATTATGCTTCAGAGTCTTTATCCACAGAGAAGAAAAGGAAGCTCTGGCAGAAATTGAGAAATTCATCTGGGGGGAGCATTAGTGAGCACGGGTTATCAAACTTCTACACAGCTTGA	2454	0.4397	MGLQLIFLLVKLHLVFCAPQLREYTATNLHNSRSHSSIAIPPSQSASKVPACTAFPPSKQFARARAHVKEWTHDSVNSPLSHHKHHHFRRKSSNPTPPYNHQGPSVFQSRPPFSSPMSRDLLAPASSPSPAVISGHLNVFSPSPRVSPQDSPLKKMKTPSPSHVLALPPPPPNTECMSVSCSEPFTYTPPGSPCGCVWPLQVKLRLSIAIYRFFPLVLELAEEIADRVLLNRSQVRIVGADAFNHQLEKTTVLINLVPKGVKFDDATAFLIYKKFWYREILSNASLFGAYKVLYVHYPGLPPSPPSTPSSISGMDDGPYPGYNNNGTLIKPLGVDLDVPMKNKQGNGRGMIIMIALSCFTVSVLFIGIAWLFLLKCGYCVQDPEQFPDASILSSSKPSGAVRSLTYGSMPDSRSMSFSSGTIIYTGSARTFTLDDIEKATNNFDASRIVGEGGFGLVYKGVLHDGRDVAVKILKRYDQHGGREFLAEVEMLSRLHHRNLVKLIGICMENQTRCLVYELIPNGSVESHLHGADKKTSPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEYDFTPKVADFGLARTALDEGNRHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLAAWVRPLLTSKEGLQTIIDPAIEANVSSDTLVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCCEFDDTSIIRSGSFHEENLPTDRHGEFSRISGEIMDFQALTETHLLSTSSGQEFESFRRHYASESLSTEKKRKLWQKLRNSSGGSISEHGLSNFYTA	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa10g1652	817	MobiDBLite	consensus disorder prediction	140	156	-	-
	Bisa10g1652	817	ProSitePatterns	Protein kinases ATP-binding region signature.	449	471	IPR017441	GO:0005524
	Bisa10g1652	817	FunFam	receptor-like serine/threonine-protein kinase ALE2	416	518	-	-
	Bisa10g1652	817	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	565	577	IPR008271	GO:0004672\|GO:0006468
	Bisa10g1652	817	PANTHER	OS01G0750732 PROTEIN	168	736	-	-
	Bisa10g1652	817	MobiDBLite	consensus disorder prediction	140	169	-	-
	Bisa10g1652	817	ProSiteProfiles	Protein kinase domain profile.	443	719	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa10g1652	817	MobiDBLite	consensus disorder prediction	76	128	-	-
	Bisa10g1652	817	Gene3D	Phosphorylase Kinase; domain 1	415	518	-	-
	Bisa10g1652	817	CDD	STKc_IRAK	449	717	-	-
	Bisa10g1652	817	FunFam	Receptor-like serine/threonine-protein kinase ALE2	519	733	-	-
	Bisa10g1652	817	Pfam	Protein tyrosine and serine/threonine kinase	446	716	IPR001245	GO:0004672\|GO:0006468
	Bisa10g1652	817	SUPERFAMILY	Protein kinase-like (PK-like)	422	716	IPR011009	-
	Bisa10g1652	817	Gene3D	Transferase(Phosphotransferase) domain 1	519	729	-	-
	Bisa10g1652	817	MobiDBLite	consensus disorder prediction	93	115	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa10g1652	Bisa-ChrBisa10	45331806	45336953	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa10g1652	173	810	Receptor kinase-like Gene Family	AT5G56890	58.589	0.0	728

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Bisa10g1652		PK_Tyr_Ser-Thr	3.7e-47	CL0016