LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa10g1645	ATGAGGTGTTCAAAGCTGTCTAATGTTCCTCCATCTATCTTATGTCTCCCCAACCTTGAAGCTTTGCTTCTAAATTCCTGTAAATCACTTACCAGCCTCACAAGCAATACCCCTGTAAGGTCACTTCGTATTCTCACTCTCCATGGATGCTCAAGACTCACTGAATTCTCTGTGACCTCAGAAAAGAAGTTGATTTTAGATCTTTCAAAAACTGCCATCAACAACGATTTTCCCTCATCAAGTTCCTGTCTTAGCAACATTCAATCTTTGACACTCAATGACTGCACAAATCTGATGAATCTCCCCTTTGATTTTAGTGAACTAAGTAACACCATTCGTCTTAGTATAGAAGGCTGCAACAAGTTAGCTTCGAATCTGCGTTTCCTGTTTGAGGGGTTAAGATCATTGACAATGCTGTCACTGGATAATTGTAGTAACTTATATGAAATTCCCAGCAACATAAGCATGTTGTCGTCACTACATGAAGATCAAGTTATCTTTGACTTCCGAAACTGCATGAAATTGGATCAGCAATCAGCAAAATCTATTGAAGCAAAAGCTGTGCTTGAGATGAACAAATATGTGTCAGCCATTGGAAAAGACATTTATTGGACGAACTGGGGTCGAGCTATATACCCAGGAAGCAAAGTTCCAGAGTGGTTCATGTACGGGACAACACAATCTCCTGTTGTTATAGATCTCTCTTCGATTCCACAGTCAAAGGATTGGACTTTCTTTTTCTGTGTCGTTGTTTCTCAGTCTCCATCCAGTGCATACATTGGAATTGCATGGGATTTTAGTAATGGTGAAAGGGTTTGTGAAGAGGATGATTATCATGTAAATGCTAGTAACATTTTGTCAGATCATGTTTTCCTTTGGTTTGTTTCAGAGCTTCCTTCACAAGTACAGACAATAATTGACGAATGCAGAGCAGATGATGAGAGCAGCAGTGAAAGTGTAAAGCTTTCAATAGAATTCATGGTCAGTACTGATAAGGGAGATGGAATAGATAAAACTAGTGTGGAGATCAAAGAGTTTGGGGTGTGCCCAACATATGCATCAGAATATCAAAATTTTATAGAACAAATGGAATTGAGGTTGAAGCCACAGTCCAGTGGAATTGGACTGAGGGTGGGTTGCTCCTATGACAACATAGATGAGAAAGAGGCAATTCCTCAGAAATCCAATGATTTTATCTTTCCAACCCCACCATCTGGGACCTGGAAGAATACCACACAGGGCTTGAAGGATATTCTCTTTCAGTGA	1266	0.3989	MRCSKLSNVPPSILCLPNLEALLLNSCKSLTSLTSNTPVRSLRILTLHGCSRLTEFSVTSEKKLILDLSKTAINNDFPSSSSCLSNIQSLTLNDCTNLMNLPFDFSELSNTIRLSIEGCNKLASNLRFLFEGLRSLTMLSLDNCSNLYEIPSNISMLSSLHEDQVIFDFRNCMKLDQQSAKSIEAKAVLEMNKYVSAIGKDIYWTNWGRAIYPGSKVPEWFMYGTTQSPVVIDLSSIPQSKDWTFFFCVVVSQSPSSAYIGIAWDFSNGERVCEEDDYHVNASNILSDHVFLWFVSELPSQVQTIIDECRADDESSSESVKLSIEFMVSTDKGDGIDKTSVEIKEFGVCPTYASEYQNFIEQMELRLKPQSSGIGLRVGCSYDNIDEKEAIPQKSNDFIFPTPPSGTWKNTTQGLKDILFQ	421

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa10g1645	421	Pfam	C-JID domain	212	355	IPR045344	-
	Bisa10g1645	421	SUPERFAMILY	L domain-like	3	162	-	-
	Bisa10g1645	421	Gene3D	Ribonuclease Inhibitor	40	198	IPR032675	-
	Bisa10g1645	421	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57	64	176	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa10g1645	Bisa-ChrBisa10	44969906	44971378	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa10g1645	22	184	WRKY Transcription Factor Family	AT4G12020	31.098	1.32e-08	55.5