Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1624 ATGTCTATGGCATCTTCGTCTTCTTCTCAGTTTTCTCGAATAAAATATGATGTTTTTATTAGCTTTAGAGGGACAGACATAAGATCTGGTTTCCTTAGCCATTTAAAAAAGGAATTGCGTCACAAGCAAATTGATGCCTATGTGGACGACAGACTTGAAACAGGAGATGAAATATCACCAGCACTTTTCAGAGCAATTGAAGAATCACTCATTTCATTGATCATATTTTCGAAAGACTATGCTTCTTCGAGATGGTGCCTAGAAGAACTTGTGAAAATCATCGAGTGCATGGAAAGACATAAGCAGATGGTGGTTCCTGTCTTCTACAACACAAATCCATCAGATGTGAGGCACCAAAAAAGGTCTTATGCAGATGCTTTAGCTAAACATAACAATAAGGAAAGGCTGCAAATTTGGAGATATGCTTTAAACAAAGCTGCTAATTTATCTGGATTTCATTCATCAAATTATGGGGATGAGGTTAAGCTTATTGAAGAAATTGTTGTTCGTGAAGAATGTTTTGAAGACCCTGGGAAACGCAGTCGATTATGGAATCCTAATGAGATATATGACGTATTGAAAGATAACAAGGGAACTAAGGCCATTCAAAGCATAACCTTATACTTGCCGAAAATTCAAGACTTGAGCTTGGTTCCTCAAGTATTTGCTGGCATGTCTGAGCTCAAATTTCTTAATTTTTCCCAGCCATATCCTGATGAGCAGATTCTGAGTCTCCCTCAGGGCCTTGTAACTTTGCCAAATGGATTAAGGTTTCTTCATTGGGTTAGTTATCCTCTAAAATCCTTACCTTCAACATTCTGTCCAGAAAGCCTTGTTGAACTCAACATGCCTCATAGCCGTGTGGAAAAACTATGGGATGGAGTTCTGCGTCTTGTAAATTTAAGGAAAATTTACCTCAGCAACTCCAAGCATCTACTCCAACTCCCAGATTTCTCTATGGCCAAAAATCTTGAAGAAGTAGAACTTGACAACTGCAGAAGCCTGCGTGAGGTTCATTCATCTATCTTATCCCTACAGAAGCTTGTGAGAATGAACCTATCTCATTGCAAAGCACTGATCAGCCTAAGAAGTGATGTCCATTTACGATCCCTTCGTGATCTCTTTCTAGGCGAATGCTCAAGACTCAAGGAATTCAAAGTAACATCACAGAACATGCAGAGTTTAAATCTAGCAGGGACAGCCATCAAAGAACTTCCCTCATCAATGGGAAATCTCAGCAAGCTTGAAACTTTCAATCTCGATCGTTGTAAAAGCCTGAAGCATCTTCCAAGGAAGCTAGCTGATTTGAGATCTCTCCGTGAGCTTCGTATTTATGGCTGCACACAACTTGATGCATCTAATTTGCATATCCTACTTGAAAGCACACGATGTTTGGAAACATTGTTGGTGGAAAAATGTCATAGCTTATTTGAACTTCCAGACAACATCGGGCGCTTATCATCACTGCATAATTTGTTACTCAAAGGAACTGATATTGAGATGTTGCCTGCAAGCATCAAGCATCTTTCACAGCTTGAAAAACTTGACTTGAGTGATTGCAAGAGGCTTTGGTCTCTACCAGAGCTTCCATCATCCCTTAAAGAGTTCTATGCCACTAACTGCACATCCTTGGAAAGAGTGGAGTTTCCTTCCATGGATGCAGACCACTTGAAACAAAACAGGATAAGAACCAGATTCCAAAATTGCTTGAACTTGGATTCACATTCACTTAAGGCTATTGGAGTAAATGCTCATCTCAACATAAAGAGAGTGGCATACGAACATCTTTCAACAACACTGGGACGAGGTGAGATCTTAGATAGTCCAGTGGAGGTTATCTACCCAGGTAGCAGTGTCCCAGAGTGGTGCATGAACAAGACAAGACATGCTTCAATAACAATTGACCTCTGTCCAGATTCACATTCTATGTTCATGGGTTTCATTTTCTGTGTGGTTGTTTGCAAGTTCCCATCAAATGACAAGAACTTCATCGGATGTGACGGTTATTTTGAAATGGGTAATGGTGAAAGGATCAAGGGTGCATGGTCTAGCCTATATGCTTATGAGTTTGATTCTGACCATGTGTGTCTGTGGTTCGATGAACGGTGTTGCCTGCAAACAAATGAGAGTCTGAATGATGAAAGCATGGAGGAGGATGTAGCCAATAGTGATCAGCCATCCAATTCTAATCAAAAGGTTTCATTTGAATTCTTTGCTCAAACTGGAACTGCTTGGGATAACAGAAATGACATTGTAATAAAAGAGTGTGGAGTCTGCCCAGTTTATGCATCAGAATATCATAAGTTCATGCAACAAATGGACTTGGAGTTAAAGTCACGACGACTCATTGGATTGGGTCCAATTGCGGTAGGAAGATCAGAGAAGAAACATGAGAATGATACACAAAAATTCAATCACTTTATCTTTCCATCACTTCCGATTGGAATCTGGAAGATTGGAACACAAGGCTTCAAAGACATCATCAACTTTTGA 2493 0.3995 MSMASSSSSQFSRIKYDVFISFRGTDIRSGFLSHLKKELRHKQIDAYVDDRLETGDEISPALFRAIEESLISLIIFSKDYASSRWCLEELVKIIECMERHKQMVVPVFYNTNPSDVRHQKRSYADALAKHNNKERLQIWRYALNKAANLSGFHSSNYGDEVKLIEEIVVREECFEDPGKRSRLWNPNEIYDVLKDNKGTKAIQSITLYLPKIQDLSLVPQVFAGMSELKFLNFSQPYPDEQILSLPQGLVTLPNGLRFLHWVSYPLKSLPSTFCPESLVELNMPHSRVEKLWDGVLRLVNLRKIYLSNSKHLLQLPDFSMAKNLEEVELDNCRSLREVHSSILSLQKLVRMNLSHCKALISLRSDVHLRSLRDLFLGECSRLKEFKVTSQNMQSLNLAGTAIKELPSSMGNLSKLETFNLDRCKSLKHLPRKLADLRSLRELRIYGCTQLDASNLHILLESTRCLETLLVEKCHSLFELPDNIGRLSSLHNLLLKGTDIEMLPASIKHLSQLEKLDLSDCKRLWSLPELPSSLKEFYATNCTSLERVEFPSMDADHLKQNRIRTRFQNCLNLDSHSLKAIGVNAHLNIKRVAYEHLSTTLGRGEILDSPVEVIYPGSSVPEWCMNKTRHASITIDLCPDSHSMFMGFIFCVVVCKFPSNDKNFIGCDGYFEMGNGERIKGAWSSLYAYEFDSDHVCLWFDERCCLQTNESLNDESMEEDVANSDQPSNSNQKVSFEFFAQTGTAWDNRNDIVIKECGVCPVYASEYHKFMQQMDLELKSRRLIGLGPIAVGRSEKKHENDTQKFNHFIFPSLPIGIWKIGTQGFKDIINF 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1624 830 SMART till_3 15 149 IPR000157 GO:0007165
Bisa10g1624 830 SUPERFAMILY L domain-like 207 549 - -
Bisa10g1624 830 ProSiteProfiles TIR domain profile. 14 175 IPR000157 GO:0007165
Bisa10g1624 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 168 IPR044974 GO:0006952
Bisa10g1624 830 Gene3D Ribonuclease Inhibitor 391 580 IPR032675 -
Bisa10g1624 830 Gene3D Ribonuclease Inhibitor 180 390 IPR032675 -
Bisa10g1624 830 Pfam TIR domain 15 169 IPR000157 GO:0007165
Bisa10g1624 830 Pfam Leucine Rich Repeat 278 295 IPR011713 -
Bisa10g1624 830 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 172 - -
Bisa10g1624 830 Pfam C-JID domain 614 765 IPR045344 -
Bisa10g1624 830 Gene3D - 13 174 IPR035897 -
Bisa10g1624 830 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1624 Bisa-ChrBisa10 44506469 44510510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1624 168 522 WRKY Transcription Factor Family AT4G12020 37.912 3.00e-55 206