Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1605 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTGAAAAGAGGGTTATGGTCACCTGAAGAAGATGAAAAGCTCATCAACTACATCACCACTTATGGCCATGGTTGCTGGAGCTCTGTTCCTAAACTTGCTGGCCTTCAAAGGTGTGGAAAAAGTTGCAGACTAAGATGGATAAATTACCTAAGACCTGATTTGAAACGTGGAAGCTTCTCTTCTCAAGAAGCAACCCTCATTATTGAACTCCATAGCATTCTAGGCAACAGGTGGGCTCAGATTGCCAAGCACCTACCAGGAAGAACAGACAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAGCTTCTCTCTCATGAAATGCTTCCTTCTTCTCTCTCCACTTTTTCTGATCATCTTCTTCATCATCATAATGCTTCTCTGGAGCCCTTCTTCCCTTTAACTTCTTCTTCTTCAAACCCTAATCTCATCCTCACCTCTCATCATCTTCAGCCTGATCATCATCATCAACTCTACCTTCCCACTCCATCGCCAATCGCACAAGATAATCATAATAATGATAATTTCCTGCATGCTCAGAATCCTATTATCCCAGAAACACCGACCAATATCATCATCAATCCATCTTCATATGAAGACATCAACAACGACAACATCACATGGTCAACAATACTGGGTCTCAACAATCCAAATCAAGAAACTCAAATTCCCAAAAGTGATGATCATCTTATTGCTGAGAAATTCATCAACCCAAGTTCAATATCAATGCAGCAGCATCATGATCACGATCACTTGGTGGAATCCATTGTGCCCAAGATCTGCGAGAGCTTCGAGGACTATGTTCTTAGCAGTGGCAACATTGTCCCGTACTCATCGTCATCTTCTTCTTCACAAGAATATTTACAGTATGACCCCGATCTTGCAAGGATCATCCAGTGTGGTTTTAATTATCCATTACAAGATCATCAAGCTTTCATTGCAGCCAATCAAATGGAGTACATTGATGCTATCCTATCATCCACAAACTCTATTGTTCCATCTAGCTGGGAGCCTTGA 1056 0.4157 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSSQEATLIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHEMLPSSLSTFSDHLLHHHNASLEPFFPLTSSSSNPNLILTSHHLQPDHHHQLYLPTPSPIAQDNHNNDNFLHAQNPIIPETPTNIIINPSSYEDINNDNITWSTILGLNNPNQETQIPKSDDHLIAEKFINPSSISMQQHHDHDHLVESIVPKICESFEDYVLSSGNIVPYSSSSSSSQEYLQYDPDLARIIQCGFNYPLQDHQAFIAANQMEYIDAILSSTNSIVPSSWEP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1605 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa10g1605 351 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa10g1605 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa10g1605 351 PANTHER MYB DOMAIN PROTEIN 55 1 298 - -
Bisa10g1605 351 SMART sant 13 63 IPR001005 -
Bisa10g1605 351 SMART sant 66 114 IPR001005 -
Bisa10g1605 351 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa10g1605 351 CDD SANT 17 61 IPR001005 -
Bisa10g1605 351 Gene3D - 69 116 - -
Bisa10g1605 351 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa10g1605 351 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Bisa10g1605 351 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa10g1605 351 FunFam Myb transcription factor 11 67 - -
Bisa10g1605 351 FunFam Myb transcription factor 69 116 - -
Bisa10g1605 351 Gene3D - 11 67 - -
Bisa10g1605 351 CDD SANT 69 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1605 Bisa-ChrBisa10 43887450 43889206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1605 1 195 MYB Transcription Factor Family AT3G13890 63.462 2.54e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa10g1605 Myb_DNA-binding 1.3e-14 CL0123