Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1604 ATGGAGACAAAAGAATGGAATCTCGCATTTATGAGTCGTCGCAATTCAGAGCGGGACGTGACGTCAGAAAAGAAAAAAGAAAAGGTCAAATTGTATCCGTTACGGCTTCTTTCATTTATTCCCTTCTTCCTTTTCCCTCAGGATAAGGGGAAGAAGAAGTGGAGGCTATGGAGGAGCTCTTCGGAAGGCGCGGTGTCGTCCTCCGTGAAAAAGAGAAACGGCGTCGTATCAGACAAGTCGGAGTCGTCTTCGTTCCTGTTGGATGATGCTTTTACAGCAGCCATGGCTGCAGTGGTCCGAGCTCCTCCTAAAGGTTTCATGGTCATCAAGCAGGAATGGGCCGCCATTCGTATTCAGGCTCTGTTTCGAGGCTTCCTGGCGAGACGAGCTCTCAGGGCACTGAGGGCGGTGGTGAGGCTGCAAGCGATATTCCGGGGACGGCAAGTGAGGAAGCAGGCCGCCGTGACTCTACGGTGCATGCAGGCTCTTGTTAGGGTTCAGGAACGTGTGAAAGCAAGGAGTGTGAGCATGTCTCCAGAAAGGAGACGCCCACAAACACCTAACCCTCTTAACCAGGCTGAGCAAGGGTGGTGTGACATTCCAGGAACTGTGGATGAGGTCAAAGCAAAGCTACAAAAGAGGCAAGAAGCAGCCATTAGAAGAGAGAGAGCAATGGCTTACTCTCTCTCCTCACAGCAATCAAGAGTGACTGGTACTCCAAACTCTAGAATCTCAAAGCCAATGTCACAACGAAGTGTAGACAGTAGGAGCTTGTTAGAGAGATGGATGGCGGCGAAGCCATGGGAGAGCAGGTTGAAGGACGAGAGATACTTCGACACACCAGACATAACACCTATGTCTAAGAGAACTGAAAACCTTATTCTCCCCAAAGCAACAAGGAATCCCATGACAACTAGGGTTTCACCAAAACCTCCCATGACGAGCCAGTCATCTCCATCATCATTGTCATCATCATCTTCTGCCGTAAGTTCTGAAAGCATGTACGACGACAGCCCTCTGTCACCTTCATCCACGTCACCTGACAAAAAGAGGAGTCTTCAGAAACCAAGTTTCATGAGCTTCACAGAGTCAACTAGGGCTAAACAGAAAACTTGCAGGTGTTCTTCTGTGAATGGCGATGCGAGAAGCAGTTCTGGGTCGGATCCTTCAGTTAATTTCTGGAAAGATGTTTATGGAACGCCCCAGAGGGGAAGGTATCAGAGAAGATGCTCTTCTAGGAGATGA 1245 0.4924 METKEWNLAFMSRRNSERDVTSEKKKEKVKLYPLRLLSFIPFFLFPQDKGKKKWRLWRSSSEGAVSSSVKKRNGVVSDKSESSSFLLDDAFTAAMAAVVRAPPKGFMVIKQEWAAIRIQALFRGFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQERVKARSVSMSPERRRPQTPNPLNQAEQGWCDIPGTVDEVKAKLQKRQEAAIRRERAMAYSLSSQQSRVTGTPNSRISKPMSQRSVDSRSLLERWMAAKPWESRLKDERYFDTPDITPMSKRTENLILPKATRNPMTTRVSPKPPMTSQSSPSSLSSSSSAVSSESMYDDSPLSPSSTSPDKKRSLQKPSFMSFTESTRAKQKTCRCSSVNGDARSSSGSDPSVNFWKDVYGTPQRGRYQRRCSSRR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1604 414 MobiDBLite consensus disorder prediction 297 391 - -
Bisa10g1604 414 ProSiteProfiles Krueppel-associated box (KRAB) profile. 1 66 IPR001909 GO:0006355
Bisa10g1604 414 MobiDBLite consensus disorder prediction 279 397 - -
Bisa10g1604 414 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Bisa10g1604 414 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Bisa10g1604 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 153 IPR027417 -
Bisa10g1604 414 SMART iq_5 110 132 IPR000048 GO:0005515
Bisa10g1604 414 SMART iq_5 133 154 IPR000048 GO:0005515
Bisa10g1604 414 MobiDBLite consensus disorder prediction 226 255 - -
Bisa10g1604 414 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Bisa10g1604 414 MobiDBLite consensus disorder prediction 173 197 - -
Bisa10g1604 414 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Bisa10g1604 414 PANTHER IQ-DOMAIN 5-RELATED 46 387 - -
Bisa10g1604 414 MobiDBLite consensus disorder prediction 179 193 - -
Bisa10g1604 414 Gene3D - 109 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1604 Bisa-ChrBisa10 43865185 43869170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1604 51 398 IQD Protein Family AT1G72670 46.753 3.82e-85 264