Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1594 ATGCTATATTTGGGTAATTCTATCCGAGGAGTCTGGGAAACCCTAGCCTCCTTTCAGAAACTACTCTCAAGTCTTAATACTCTCTGTTTTGCTCGTTTCTCTTCTCTCTGTCGCTACTATACCAGCAAGTATTCAACGCTTTTCCAGCTTTACCTGGATGGGATTAGTGATGAAAAATGCTTTCCGCTCAAGGACTCATTTCATAAATTAGATATGCTCAATCTTGGAGGAGTGGGCAAAGCGGTGTCTGACACTGAAGGGTTTTTATTCAGGATTGCTGATATCCTTATGGCAGGTTTGGCTCCCGAAGGAACGCAATTTGATGCTCGTCAATATGATGCTAAAATGAGTGAATTGCTTTCTGCTGATGGACAAGATTTTTTCACTTCATATGATGAGGTCTATGATACTTTTGATGCAATGGGATTACAAGAAAATCTTCTGAGAGGCATCTATGCTTATGGTTTTGAGAGGCCTTCTGCAATCCAGCAGAGGGGAATTGTTCCTTTCTGCAAAGGTCTTGATGTCATTCAGCAGGCTCAGTCTGGAACTGGGAAGACAGCAACATTCTGCTCAGGAATTTTGCAGCAACTTGATTATGGGTTAGTTCAGTGCCAAGCTTTGGTTTTGGCACCAACAAGAGAGCTAGCACAGCAGATTGAGAAGGTTATGCGGGCTCTTGGGGACTACCTTGGTGTTAAGGTTCATGCTTGTGTAGGAGGAACAAGTGTTCGGGAGGATCAGCGCATTCTCCAAGCTGGTGTCCATGTTGTTGTTGGAACACCTGGTCGTGTGTTTGACATGCTACGGAGGCAATCTCTTCACCCAGATTACATAAAGATGTTTGTTCTGGATGAGGCTGATGAAATGCTTTCTCGTGGCTTCAAGGACCAGATCTATGACATCTTCCAGCTACTTCCCGGTAGAATTCAGGTTGGAGTATTCTCTGCTACAATGCCTCCAGAAGCTCTTGATATTACTAGGAAGTTCATGAATAAGCCAGTTAGAATCTTGGTAAAGCGTGACGAACTGACCCTTGAGGGTATCAAGCAGTTTTATGTGAATGTTGATAAGGAAGACTGGAAACTAGAGACATTATGTGACCTTTACGAGACACTTGCTATTACCCAGAGTGTCATTTTTGTGAACACCAGGCGCAAGGTGGACTGGCTCACGGACAAGATGCGAAGCAACGACCATACAGTATCGGCAACCCATGGTGACATGGACCAAAACACTCGAGATATCATCATGCGTGAATTCCGGTCCGGCTCTTCTAGAGTTCTGATTACGACTGATCTTTTGGCTCGTGGTATTGATGTGCAGCAAGTCTCTCTTGTTATTAACTATGATCTCCCAACCCAGCCTGAAAATTATCTTCATCGTATAGGACGAAGTGGACGATTTGGAAGAAAAGGTGTTGCTATAAACTTTGTGACAGTAGATGATGCAAGAATGCTGTCTGATATTCAGAAGTTCTATAACGTATCCATAGAGGAGTTGCCATCAAATGTTGCTGATCTGCTCTGA 1530 0.4366 MLYLGNSIRGVWETLASFQKLLSSLNTLCFARFSSLCRYYTSKYSTLFQLYLDGISDEKCFPLKDSFHKLDMLNLGGVGKAVSDTEGFLFRIADILMAGLAPEGTQFDARQYDAKMSELLSADGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGRIQVGVFSATMPPEALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTVDDARMLSDIQKFYNVSIEELPSNVADLL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1594 509 Gene3D - 126 344 IPR027417 -
Bisa10g1594 509 CDD SF2_C_DEAD 349 479 - -
Bisa10g1594 509 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 283 291 IPR000629 -
Bisa10g1594 509 FunFam Eukaryotic initiation factor 4A-II 124 343 - -
Bisa10g1594 509 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 167 337 IPR014001 -
Bisa10g1594 509 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 348 509 IPR001650 -
Bisa10g1594 509 SMART helicmild6 389 470 IPR001650 -
Bisa10g1594 509 Gene3D - 345 509 IPR027417 -
Bisa10g1594 509 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 136 164 IPR014014 GO:0003724
Bisa10g1594 509 PANTHER RNA HELICASE 120 493 - -
Bisa10g1594 509 CDD DEADc_EIF4A 140 338 - -
Bisa10g1594 509 SMART ultradead3 155 352 IPR014001 -
Bisa10g1594 509 FunFam Eukaryotic initiation factor 4A-III 344 509 - -
Bisa10g1594 509 Pfam Helicase conserved C-terminal domain 362 470 IPR001650 -
Bisa10g1594 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 490 IPR027417 -
Bisa10g1594 509 Pfam DEAD/DEAH box helicase 161 322 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1594 Bisa-ChrBisa10 43763862 43767466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1594 97 509 Eukaryotic Initiation Factors Gene Family AT1G72730 87.440 0.0 759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1594 10 43763862 43767466 Bisa06g1672 06 56303380 56308609 CCT