Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1578 ATGATCGGCAAGGCAACAAGATGGAAAGATCCGATCAAGAACGGGCAGAAAGGGGTCTTAATCAACCTTATAGAGAGGGCCTGCCAGTTGAGGATGAGTTTGCAACAAGGTGGGCAGTCTAGATCCTCTAATGGATATGGGCGTCGAAAGACTGAAAGAGAAGGGGCAGCTAAGTCAGAGAATAAGATCCCATCTGGGAAGTCAAATGCCAACAGATCGGCAAGTACAGGTGCAGTGACTGGCACTATAGGTGGTAGTTTTGAGGGTCCTTCACGTGATCGACTAGTATATGTAACAACATGTCTTATTGGACAACAGGTGGAAGTACAGGTGAAAGATGGATCCATATACTCTGGAATCTTTCATGCAACAAATAATGAGAAAGATTTTGGAATCATTTTGAAGATGGCTCGCTTGACAAAAGATGGTTCTTTGCGAGGGCAGAAGTCTGGTGTAGGATTGGTCAGCAAGGCTCCTTCAAAGACTCTAATTATATCTGCCAAAGAACTTGTACAAGTCATAGCGAAGGGTGTTGCTGTTTCTAGGGACAGCCTACCTAGTGATGCTTATCATGAAACACATCAGGACATCATGGTTGATTCAGTAATATCGCAATCCCGTCATGTTGACTCAGAGAGAGAACTTCAGCCCTGGGTGCCTGATGAAGATGATCCACAATGTCCTGAACTAGAAAATATCTTTGATGGCCCTTGGAATAGGGGCTGGAATCAGTTTGAAACAAATGAAGCATTGTTTGGTGTAAAAAGCACGTTCAATGAGGAACTTTATACAACAAAACTTGAGAAAGGACCTCAGATGAAAGAGTTGGAGCAACAAGCTTCAAGAATAGCAAAAGAAATTGAGGGTGAGGATACCCATGATCTTCATCTAGCAGAGGAAAGAGGCATTTATCTTCATAAGAATTTTGATATTGATGAAGAGACTAGATTCTCTTCAGTCTATAGGGATAAGGGGGTTGATGAAGATGAGGACATGCTGTTGGATTCCCATAATTCTGAAACATTTGGTGGAAAAGTCAATGATGGGGCTAGAACATCATCTAATTCCTCCTCTATGGATTTCCCACAATTGACTCAGTCAAGTGCTGGTGTGGATTTAATGCGTTCTGGTTCTCATGATCATGCTAAGCAGTTAGCATCTGAACTCCCTGCCAAAAGCAACCCTACTTCAGATGCTGAAAGCAGGATTCAGGAGAACTCACATAGTGATGTGCATGGAGCCAATGGTAATAGCAAGGAAGAAAACCAGATACAAGCTGAGGATGTTCAACTGTCAAAATCTGAGGGGGGATTATCTTCGAGGGCCACCTCTTACACTCCATCTCAAATTTTATCGAAGACTTCTGAAAAAACTGGTTTGCCTGGTGATTTAACTGAGGGTTCATCATCTGGCAAAGGTAAAGGGGAAACAAATGCTTTGAACTCCCTTGGAAGAACTGCTAGTTCTACATCAACTGGTTCAGATTGTGTAAGAGTTGTTACAGCATCTTCTGGACCTGGTCTATCGCCAAGTTCTTCATTGAGTTCGTTATCTTCGGAAAAATCAACTCTGAATCCCAATGCTAAGGAATTTAAGCTCAATCCTAATGCGAAGAGTTTTGTTCCATCCCATTCACCTGTTAGGCCTCCTTCCCCAGTGTCAGATGGCTCCTTCTATTTCCCAACTAATGTAACTACTGTACCACACATGCCAGCCATGCCCATGGATATGGGAATGGGACCTGCGTTTGCTGGGCCACAACCTGTCATGTATAATCCACAGGTAGCACAGATGCCATCCCAAGCATATTTTCATCCGAATGGACCACAGTACGGGCAGCTTCTTGGTCATCCTAGGCAAGTTTTGTACATGCCAGGTTATCTGCCTGAAACACCATATAAGGGACGGGATTACTAA 1917 0.434 MIGKATRWKDPIKNGQKGVLINLIERACQLRMSLQQGGQSRSSNGYGRRKTEREGAAKSENKIPSGKSNANRSASTGAVTGTIGGSFEGPSRDRLVYVTTCLIGQQVEVQVKDGSIYSGIFHATNNEKDFGIILKMARLTKDGSLRGQKSGVGLVSKAPSKTLIISAKELVQVIAKGVAVSRDSLPSDAYHETHQDIMVDSVISQSRHVDSERELQPWVPDEDDPQCPELENIFDGPWNRGWNQFETNEALFGVKSTFNEELYTTKLEKGPQMKELEQQASRIAKEIEGEDTHDLHLAEERGIYLHKNFDIDEETRFSSVYRDKGVDEDEDMLLDSHNSETFGGKVNDGARTSSNSSSMDFPQLTQSSAGVDLMRSGSHDHAKQLASELPAKSNPTSDAESRIQENSHSDVHGANGNSKEENQIQAEDVQLSKSEGGLSSRATSYTPSQILSKTSEKTGLPGDLTEGSSSGKGKGETNALNSLGRTASSTSTGSDCVRVVTASSGPGLSPSSSLSSLSSEKSTLNPNAKEFKLNPNAKSFVPSHSPVRPPSPVSDGSFYFPTNVTTVPHMPAMPMDMGMGPAFAGPQPVMYNPQVAQMPSQAYFHPNGPQYGQLLGHPRQVLYMPGYLPETPYKGRDY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1578 638 MobiDBLite consensus disorder prediction 340 373 - -
Bisa10g1578 638 MobiDBLite consensus disorder prediction 336 530 - -
Bisa10g1578 638 SMART LsmAD_2 252 323 IPR009604 -
Bisa10g1578 638 Pfam Ataxin 2 SM domain 92 176 IPR025852 -
Bisa10g1578 638 PANTHER ATAXIN 2-RELATED 65 630 IPR045117 GO:0003723
Bisa10g1578 638 Pfam Ataxin-2 C-terminal region 520 532 IPR009818 -
Bisa10g1578 638 Coils Coil 273 293 - -
Bisa10g1578 638 MobiDBLite consensus disorder prediction 389 530 - -
Bisa10g1578 638 MobiDBLite consensus disorder prediction 34 85 - -
Bisa10g1578 638 MobiDBLite consensus disorder prediction 46 60 - -
Bisa10g1578 638 MobiDBLite consensus disorder prediction 62 82 - -
Bisa10g1578 638 Pfam LsmAD domain 252 322 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1578 Bisa-ChrBisa10 43500224 43514403 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1578 10 43500224 43514403 Bisa06g1622 06 54818073 54820911 CCT
Bisa10g1578 10 43500224 43514403 Bisa10g1578 10 43500224 43514403 ECH