Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1573 ATGAACGCTTATGCTGGAGTTTTCATAGTGGCATCACTGGTAATTGCAATCATCTTCTTCAGTTTCACCCTTCTCGGATGGTGCAGTCTCAGAAGCATTCGTATCATACAGTCTCTTCCTCCAGCACGAACACAGACACTTGACAAGTTCTCTTCTTGCATGACGAGCTTAGAGTCTCATTCCATTACATTTCTGTATAAAGCAGCAGAAACTGTACAAGGCACTTTTCAGACTGAATGTGTCATCTGCTTGACACCCTTTGAGGAAGAAGACAGTGTCAGGCAGCTTCATCGCTGCAAACACATCTTTCACACACATTGCATTGACACGTGGCTCGGCTCTCATTCAGGATGCCCCTTGTGCCGAACCCAGATTGGTCAAGCGCCTTCCCCAAAGGAGACCTTTCCAAGTGGATCTATGGCTTCAGAGGAAAATGGTCAGAACCAGATGATCTTGGTCACTGTCAGCTCTTGA 474 0.4641 MNAYAGVFIVASLVIAIIFFSFTLLGWCSLRSIRIIQSLPPARTQTLDKFSSCMTSLESHSITFLYKAAETVQGTFQTECVICLTPFEEEDSVRQLHRCKHIFHTHCIDTWLGSHSGCPLCRTQIGQAPSPKETFPSGSMASEENGQNQMILVTVSS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1573 157 SUPERFAMILY RING/U-box 79 128 - -
Bisa10g1573 157 SMART ring_2 80 121 IPR001841 -
Bisa10g1573 157 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 128 IPR044675 -
Bisa10g1573 157 CDD RING-H2_EL5-like 79 122 - -
Bisa10g1573 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 127 IPR013083 -
Bisa10g1573 157 Pfam Ring finger domain 79 122 IPR001841 -
Bisa10g1573 157 ProSiteProfiles Zinc finger RING-type profile. 80 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1573 Bisa-ChrBisa10 43414932 43415405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1573 63 154 Rapid Response to Elicitors AT3G05200 37.634 3.07e-18 78.6