Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1557 ATGATGAGTACTGCAAGAAATAGGCCTCCTTTCACAGCTGCTCAATGGCAAGAACTTGAACAGCAAGCTCTTGTCTTCAAATACATGGTCTCAGGCAATCCCATCCCTCCTGATCTCATCTTCTCCATCAAAAGAAGCCTTGACTCTTCACTATCTTCCAGACTCTTCCCTCACCACCCCATTGGGTGGGGATGTTTTGATATGGGGTTTGGGAGGAAAGTAGACCCAGAGCCAGGGAGGTGCAGGAGAACAGATGGGAAGAAATGGAGATGCTCAAAGGAGGCATATCCAGACTCTAAGTACTGTGAAAAGCACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCATCTGTAACAAGCATTTCTACAAACACCTCGCCTGCAATGTCATCCTACAACATTAAACCCCCTTCGATCTCTTCTTCTTTCCCTTTCTCTGAATCATCAATGTCTTCCCAATATCCTTACCAGAATTACTCCCTTAACCCCTTCTTTTACACCCATCCAACCCCCTCCAGACCCCCTGATTCCGATTTCTCACCCCAAATGAGCACTACCCATAATCTGTTTTTGGACTCTGGATCTTATTCTCACGATGAAAAAGATTATAGGCATATTCATGTGGATGAAAGATCATTTTTCCCAGAAGCTTCAGGGACTGCTAGTGCTAGAAGCTACCCTGAGTCGTACCAACAATTATCCATGAGCTCCTCTTACAAATCCTACACAAACTCCTCACATCACTTTCAGAATCTCAGTGATAATAGTAACAATCCCAGACAACAAGAAGAAGAGCAACATTGTTTTGTTCTTGGCACAGACTTCAAGTTGGCGAGACCAATCAAAAACATTGCTCATTTGCAAATCAAGCTATCTCCTCCTCTATTCTTGTATTCATTCAAACTTTTGGGTTCTTTATGA 936 0.4338 MMSTARNRPPFTAAQWQELEQQALVFKYMVSGNPIPPDLIFSIKRSLDSSLSSRLFPHHPIGWGCFDMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVSSSVTSISTNTSPAMSSYNIKPPSISSSFPFSESSMSSQYPYQNYSLNPFFYTHPTPSRPPDSDFSPQMSTTHNLFLDSGSYSHDEKDYRHIHVDERSFFPEASGTASARSYPESYQQLSMSSSYKSYTNSSHHFQNLSDNSNNPRQQEEEQHCFVLGTDFKLARPIKNIAHLQIKLSPPLFLYSFKLLGSL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1557 311 Pfam WRC 76 118 IPR014977 -
Bisa10g1557 311 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa10g1557 311 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Bisa10g1557 311 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa10g1557 311 PANTHER GROWTH-REGULATING FACTOR 5 9 243 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bisa10g1557 311 MobiDBLite consensus disorder prediction 106 138 - -
Bisa10g1557 311 MobiDBLite consensus disorder prediction 116 138 - -
Bisa10g1557 311 Pfam QLQ 10 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1557 Bisa-ChrBisa10 43142050 43144508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1557 8 289 GRF Transcription Factor Family AT3G13960 39.339 1.00e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bisa10g1557 WRC 2e-21 No_clan