Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1554 ATGACCATGGAACCAAACCCAGCATCAGATCACATTCTAGATTGGATTGAAGGCTCCGTTTCTTTCTTCCCATCTTTCTTGGATGATCCATACAACGCAGGTGGCATCGAAGATTATGAGTTGTGGGGTCAGGGACAAGACATCATCGGCCAACAGTACCAGGTTGATGCTGGTCCTGCTTCTCCCAATGCCGCCACCACCACCACCACAACCAGTTCTGCTGCTATTAGCACCAGCAATAATCCACCAACTTCTGATCTACCAAAGAATAGAAATACTTCTGATGATTTATGTCTGAAATCATCTCAGAATCATAAGTCCAAGAAGAGTAAAAGCCGTCCAATGAGTGAAGCGGACAATGGAGATGCAGTTGTTGAAGGGACAACAGTAAAGAAATCTAACAAAAAGGGATCTACTAAGGCCAATGGAAATAACTGTAATAACGGTAATAAAGAAGGGAGGTGGGCAGAGCAATTGCTGAACCCTTGTGCTATAGCTCTGGCCGCATGGAATCTGAACCGTGTGCAGCACCTTTTATATGTTCTCCATGAGCTCGCCTCGCCTACCGGCGACGCCAATCACCGGCTAGCAGCTCACGGTCTCCGAGCACTGACACAACAGTTATCTTCTTCTACAGCCATTTCTTCCTCCGCTGCATCTGCAGGTCCTATTACTTTTGCTTCTGCAGACCCAAGGTTCTTCCAGAAATCTCTGCTCAAGTTCTATGAGGTTAGCCCTTGGTTTTCATTTCCCAATAGCATAGCAAATGCTTCCATTCTGCAAATTCTTGCTGAAGAACCAAACAATTCACATACCCTTCACGTCCTTGACATTGGGGTCTCTCATGGATTTCAATGGCCAACATTTCTAGAGGCCTTGACTCGCAGACCCGGCGGGCCTCCTCCGCTGGTTCGCCTCACGGTGGTGACTGCCTCTGCAGAAAATGACCAAAATATGGAGACCCCATTTTCAATAGGTCCACCCGGTGACAACTTTTCTAATAGACTCCTTGGTTTTGCCAAATCCCTGAACGTCAATTTACAGATAAACAGGCTTGATAATCATCCATTACAGACTCTAAATGCCCAAATTCTCAATCCCTCACCAGATGAAACCTTCATTGTTTGTGCACAATTTAGGTTGCACCACCTGAATCATAACACTCCTGATGAACGAAACGAGTTTCTGAAGGTGCTGAAGAACATGGAGCCCAGGGGGTTGATATTAAGTGAGAACAACATGGAATGTTGCTGCAACAGTTGTGGGAATTTCGCCACTGGGTTTGAGCGAAGAGTGGAGTTCCTATGGAAGTTTTTGGATTCGATAAGCTCAGCGTTCAAGGGCCGGGAGAGTGAGGAGAGGAGACTGATGGAAGGGGAGGCTGCGAAGGCATTGACAAACCAGCGTGAGATGAATGAAGGGAAAGAGAAATGGTGTGAGAGGATGAAAGAAGCAGGGTTTGTAGGGGAGACATTTGGAGACGACGCCATTGATGGATCTCGGGCTTTGTTGAGGAAGTATGATAATAATTGGGAAATGAAAGTAGAAGAGAACAATACGAGTGTGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGCACATTATGGAAGCTGAACAAGAACCTCAAGGGTGGATCAGGTTCAACATTGACTACTCAGCTTTAG 1668 0.4628 MTMEPNPASDHILDWIEGSVSFFPSFLDDPYNAGGIEDYELWGQGQDIIGQQYQVDAGPASPNAATTTTTTSSAAISTSNNPPTSDLPKNRNTSDDLCLKSSQNHKSKKSKSRPMSEADNGDAVVEGTTVKKSNKKGSTKANGNNCNNGNKEGRWAEQLLNPCAIALAAWNLNRVQHLLYVLHELASPTGDANHRLAAHGLRALTQQLSSSTAISSSAASAGPITFASADPRFFQKSLLKFYEVSPWFSFPNSIANASILQILAEEPNNSHTLHVLDIGVSHGFQWPTFLEALTRRPGGPPPLVRLTVVTASAENDQNMETPFSIGPPGDNFSNRLLGFAKSLNVNLQINRLDNHPLQTLNAQILNPSPDETFIVCAQFRLHHLNHNTPDERNEFLKVLKNMEPRGLILSENNMECCCNSCGNFATGFERRVEFLWKFLDSISSAFKGRESEERRLMEGEAAKALTNQREMNEGKEKWCERMKEAGFVGETFGDDAIDGSRALLRKYDNNWEMKVEENNTSVGLWWKGQPVSFCTLWKLNKNLKGGSGSTLTTQL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1554 555 ProSiteProfiles GRAS family profile. 147 538 IPR005202 -
Bisa10g1554 555 MobiDBLite consensus disorder prediction 56 149 - -
Bisa10g1554 555 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 133 526 IPR005202 -
Bisa10g1554 555 MobiDBLite consensus disorder prediction 131 149 - -
Bisa10g1554 555 MobiDBLite consensus disorder prediction 56 100 - -
Bisa10g1554 555 Pfam GRAS domain family 157 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1554 Bisa-ChrBisa10 43058452 43060119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1554 2 538 GRAS Transcription Factor Family AT3G13840 49.818 4.76e-173 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa10g1554 GRAS 6.3e-74 CL0063