Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1537 ATGCCTTCCAAAAGGTTTCTTTTCAAGTCCTCCTTCATTCCTGCCTGTTTCAAGGCCAAGAACAGTCATCATCATGATCATAATTCCTCTGCTTCCAAGAAGACATCCTCCTCAAGGAGAATCTCTCTTTCCGATTTGAGCGCTTCTTCATCCATCTCCATCATGAGTGATCTGTCCAACTCGGTTCTTGCCTCAAATCTGCATATCTTCACCTACAAGGAGCTCAAGGAGATCACCCACAACTTCTGCAAAACCAGTGTTCTTGGAGAAGGTGGGTTTGGGAAGGTTTATAAGGGCTTCATTGATGACAAGCTCAGGCCTGGCCTTCAAGCTCAGGTTGTAGCAGTTAAAGCTCTGGACTTGGATGGAAAACAAGGCCACAGAGAGTGGTTGGCTGAAGTGATATTCCTGGGACAGTTGAAGCATCCCCATTTGATGAACCTGATTGGATACTGCTGTGAAGACGAGCACAGGCTTCTGGTTTATGAATACATGGAGAGAGGCAATCTAGAGAACAAGCTTTTCAAGGGTTATTTAGCAGCCTTGCCTTGGCTAACAAGAATCAAAATAGCAGTTGGTGCAGCAAAAGGGCTAGCTTTCCTTCATGAAGAAGACCAACCTGTCATATACAGAGATTTCAAAGCCTCTAACATCTTATTAGACGCTGATTACAATGCCAAGCTCTCTGATTTTGGGCTGGCTGTGGATGGGCCAGAAGACAATAAGACCCATATAACAATGCGGGTCATGGGTACCCATGGATATGCGGCTCCGGAGTATATCAACTCAGGCCATTTGACAACGATGAGCGATGTGTATAGCTTCGGAGTGGTTCTTTTGGAGCTAATAACAGGAAAGAGATCAGTGGACAAGAGCCGTCCGATGAGGGAACAAGATTTGGTGGAGTGGGCAAGACCCTCTCTGAAGGACTCTCACAAGCTCGAAAGAATAATAGACCCAAGACTGGAGGGTCAATACTCCTACGAAGGAGCCAGAAAAATGGCTGCTTTGGCTCACCAGTGTCTGAGCCAACAAGCCAGGTCAAGACCCTCCATGCGCACCGTGGTCAACACCCTCCAGCCTCTCATGACCCTCACTGACATCCCAGTCGGCTGCTTCGTCTATGTGGTCCCCTCTGAAGAAAATCCAGTTCAGTGTGAGGACGTAACTGAAGCGAAAAAGAAGATGGAGGGTCGTTTTGGGAATGGGAAAAGTCGTAGATTTAGACGTGAGATTAAGGTGAAGCCAGTGAGGTCGTCTCGTTCTCTTCACTCCGATACTGCTCTGTATAAAATTCTTGGGACTGCTCTTTACTCTCCCAAGCAAGCTCCAGAATTACACGAAAATGGAAGCCTAATAGTATGA 1365 0.4681 MPSKRFLFKSSFIPACFKAKNSHHHDHNSSASKKTSSSRRISLSDLSASSSISIMSDLSNSVLASNLHIFTYKELKEITHNFCKTSVLGEGGFGKVYKGFIDDKLRPGLQAQVVAVKALDLDGKQGHREWLAEVIFLGQLKHPHLMNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIAVGAAKGLAFLHEEDQPVIYRDFKASNILLDADYNAKLSDFGLAVDGPEDNKTHITMRVMGTHGYAAPEYINSGHLTTMSDVYSFGVVLLELITGKRSVDKSRPMREQDLVEWARPSLKDSHKLERIIDPRLEGQYSYEGARKMAALAHQCLSQQARSRPSMRTVVNTLQPLMTLTDIPVGCFVYVVPSEENPVQCEDVTEAKKKMEGRFGNGKSRRFRREIKVKPVRSSRSLHSDTALYKILGTALYSPKQAPELHENGSLIV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1537 454 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 165 368 - -
Bisa10g1537 454 CDD STKc_IRAK 88 362 - -
Bisa10g1537 454 SUPERFAMILY Protein kinase-like (PK-like) 57 359 IPR011009 -
Bisa10g1537 454 FunFam Serine/threonine-protein kinase BIK1 25 164 - -
Bisa10g1537 454 Gene3D Transferase(Phosphotransferase) domain 1 165 368 - -
Bisa10g1537 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bisa10g1537 454 PANTHER OS01G0588500 PROTEIN-RELATED 35 362 - -
Bisa10g1537 454 Pfam Protein tyrosine and serine/threonine kinase 86 359 IPR001245 GO:0004672|GO:0006468
Bisa10g1537 454 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1537 454 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Bisa10g1537 454 Gene3D Phosphorylase Kinase; domain 1 52 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1537 Bisa-ChrBisa10 42407970 42410375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1537 57 390 Glycoside Hydrolase AT3G07070 48.665 1.26e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa10g1537 PK_Tyr_Ser-Thr 9.9e-47 CL0016