Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1523 ATGAAGAGGTTTGGAGAGCTCTGTAAGCCAAAACAAATTCTGCTCAAGACTGGTTCTGATCAGTTCTGGAGAGTTGACGTAGCGAAAGCTAATGGAAGTGTGTACTTCCGGAAGGGGTGGGAGAGGTTTGTGAAAGACAATCTTTTGGAACAAACAGACTTTGTAGTCTTCAAGCATGTGAAGAATTCAACTTTCAAAGTGAAGATGTATGGCTCCCATGGCTGCGAGAAGAGAGTTCAGGTGGTGAGAGAGCACACCAAGGTAGAGGACACCACTCCCACGACGAAACATCAAAAGCCGAGATCTCCCAAGAATCATATCCCCAGAGAAGGATTCAAGGAGGTTAAAACTGAGAGTGCAGATGACAATTTCATCGACATAGATCCTCCAAGTGACAATGAAGAAGATGAGCGCAAATCAGCAGTGAAGAAACGAAGAAGCAAGGGGGGTATTGAAGAGAGGAATACTGCAAGTGCGGCTCTTGAAGAAGCAAAGAGATTCAAGTCCAAATTTCCTTTCTTCCATGTTGTTCTCCAGCGATCTTATGTCAATTCTGCTATGTACATGCCAACAAGGTTTTACAAGACATACATGAAGGAAAGGGAGATGAGGGCGAAGCTGGAGGTGGCAGGAAGATTGTGGAGTGTGGGGTTGAAAGGGAGAGGACCTGGGAACTCCAACTACGTCAAAATGGCTGAAGGCTGGAAAGTGTTTTCCAGAAACAACAACCTCAAGCCTGGAGATGTTTGTGTCTTTGAGATGACCAACAGGGTCAGTTTTGTGTTTAGAGTGCATATCTTCAGATGTTGA 810 0.4494 MKRFGELCKPKQILLKTGSDQFWRVDVAKANGSVYFRKGWERFVKDNLLEQTDFVVFKHVKNSTFKVKMYGSHGCEKRVQVVREHTKVEDTTPTTKHQKPRSPKNHIPREGFKEVKTESADDNFIDIDPPSDNEEDERKSAVKKRRSKGGIEERNTASAALEEAKRFKSKFPFFHVVLQRSYVNSAMYMPTRFYKTYMKEREMRAKLEVAGRLWSVGLKGRGPGNSNYVKMAEGWKVFSRNNNLKPGDVCVFEMTNRVSFVFRVHIFRC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1523 269 ProSiteProfiles B3 DNA-binding domain profile. 172 269 IPR003340 GO:0003677
Bisa10g1523 269 ProSiteProfiles B3 DNA-binding domain profile. 1 73 IPR003340 GO:0003677
Bisa10g1523 269 Gene3D - 1 75 IPR015300 -
Bisa10g1523 269 SMART B3_2 174 264 IPR003340 GO:0003677
Bisa10g1523 269 SMART B3_2 2 73 IPR003340 GO:0003677
Bisa10g1523 269 MobiDBLite consensus disorder prediction 84 154 - -
Bisa10g1523 269 SUPERFAMILY DNA-binding pseudobarrel domain 167 268 IPR015300 -
Bisa10g1523 269 CDD B3_DNA 172 268 IPR003340 GO:0003677
Bisa10g1523 269 Pfam B3 DNA binding domain 174 268 IPR003340 GO:0003677
Bisa10g1523 269 Pfam B3 DNA binding domain 9 69 IPR003340 GO:0003677
Bisa10g1523 269 CDD B3_DNA 1 70 IPR003340 GO:0003677
Bisa10g1523 269 SUPERFAMILY DNA-binding pseudobarrel domain 9 75 IPR015300 -
Bisa10g1523 269 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 8 268 IPR044837 -
Bisa10g1523 269 MobiDBLite consensus disorder prediction 132 154 - -
Bisa10g1523 269 Gene3D - 153 269 IPR015300 -
Bisa10g1523 269 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1523 Bisa-ChrBisa10 41817851 41820309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1523 13 268 B3 DNA Binding Superfamily AT3G18990 26.623 2.71e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa10g1523 B3 8.1e-14 CL0405