Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1517 ATGGCCATATCTCCGGCGTCTCTGAGGCCAAATCTCGTCTTCTTCTCCGTCTTCTCCGTTTTCGTCTTTGTCTTCCCGACCTCAAATTCGTTGTCAGAAGCCGAAGCATTGCTCAATTTCAAGAAGTCATTGTCGAACACCGAAGCCCTCGGTAATTGGGTCCCTAACTCTTCACCTTGTAACGAATCGGAGCCATGGGAAGGAGTTCTGTGCTATAGAGGCATTATCAGGGGGCTTCGCCTCGATGAAATGGGGCTATCGGGGACCATAGATATCGACGCGTTGGTTGAGCTCAAGGGTCTTCGAGGTATTAGCTTCGCGAAGAATTCGTTCTCGGGGTCGTTCCCGGAGTTTAATCGGATAACATCTCTGAGATCCTTGTCTGCATCAGAAAATCAGTTCTCAGGTTGGATTCCTTTGGATTACTTTCAGAGAATGTGGAAGTTGAAGAAACTGAGGCTGAACGATAACAATTTCACGGGTCAAATTCCATCGTCGATAGCTCAACTGCTAAAACCTATCGAGTTACATTTTGAGAACAATCAGTTCAGTGGACGCATTCCTGATCTGAATATACCCTCGTTAGTGATATTCAATGTATCGAACAACAAATTGGAAGGTGAAATCCCTACTGGGTTATCCAAATTGGATAAGAGCTTGTTTGCCGGGAATTCTGGTCTCTGTGGTGAGAAATTAGGGAAATCTTGTGAAAAAGAAGCAGATAGACAGAACAGTAATAATGGTAATGTGTCTAAATCAAGTCAGCTTAGCATAGCGAAGATTGCTATCATTGCAGCAGCAGTTGTAGCAGTTATAGCCATTATCTCACTTCTTGTTTGTGTTGTTTTGAGACTAAGGAGAAGAAAGGAAGACAATCTTGATAAGCTAGTAAAAGAACATAAAGAAGAAAACAAAGAAGAGAAAGTTGAAGTTCAGGTAGCTGAAGCATCTATAAAAAAACAAGTATCTTCGATCAAAAAAATAGGTTCGAGCAAGAAGGGATCCTCCCGGGGTGGAGGCTTTGGAGATCTCATTATGATCAATGATGAGAAGGGTTGTTTTGGGTTGTCAGATTTGATGAAGGCATCTGCAGAAGTGCTGGGAAATGGAGGGATGGGATCTTCTTACAAAGCAGTGATGGCTAATGGGTTGACAGTGGTGGCGAAGAGGATGAAGGAGATGAAGGCATTAGGGAAAGATGGATTTGAAGCAGAGATGAGGAAGATTGGAAAGCTGAAACACTGGAATATATTGACCCCTTTGGCTTATCATTATAGGAAGGAAGAGAACGTCGTGGTCTTTGAATACGTTCCCAAAGGCAGTCTTCTATATTTGTTGCATGGGGATAGAGGACCATCACATGCTGAACTAAACTGGCTTACTCGGTTGAAGATTGTTCAGGGAATAGCTGAAGGTCTGGGTTATCTTTATACAGAACTTCCCTCTGATCTACCACATGGCAATCTCAAGTCCAGCAATATTCTTCTTGGGCCAAGTAACGAGCCACTGCTTATGGACTTTGGATATAACTCCATGGTTAGCTCTCCCTGTGTAAGAACTCAAGCTTTATTTGCTTATAAGGCTCCAGAAGTAGTACAGGGTGGCCAAGTTTCTCCAAAATCTGACGTTTTCTGTTTAGGAGTCGTCATTCTTGAACTGCTTACTGGGAAATATCCTGCCCAATATCACAGCAATGGGAAGGGTGGATTTGATGTAGTGCAATGGATTGTAACAGCAATTTCTGAGGAAAGAGAATCAGAACTAATTGATCCTGAAATTGCAGGCTCTAAAAATTCAGTTAGTGAAATGGTGGGACTCCTACATATAGGTGCTGGTTGCACTGAAAGTAACCCCGAGAACCGATTGGACTTGATGGAGGCCATTAGAAGGATACGAGACATAAAACCAGAGGGCGGCAAAAATTTCTTGTCATCTCTGAGAAATAGTTATGCAGATTCCACTAACATACAAAGCGGGTGA 1980 0.4293 MAISPASLRPNLVFFSVFSVFVFVFPTSNSLSEAEALLNFKKSLSNTEALGNWVPNSSPCNESEPWEGVLCYRGIIRGLRLDEMGLSGTIDIDALVELKGLRGISFAKNSFSGSFPEFNRITSLRSLSASENQFSGWIPLDYFQRMWKLKKLRLNDNNFTGQIPSSIAQLLKPIELHFENNQFSGRIPDLNIPSLVIFNVSNNKLEGEIPTGLSKLDKSLFAGNSGLCGEKLGKSCEKEADRQNSNNGNVSKSSQLSIAKIAIIAAAVVAVIAIISLLVCVVLRLRRRKEDNLDKLVKEHKEENKEEKVEVQVAEASIKKQVSSIKKIGSSKKGSSRGGGFGDLIMINDEKGCFGLSDLMKASAEVLGNGGMGSSYKAVMANGLTVVAKRMKEMKALGKDGFEAEMRKIGKLKHWNILTPLAYHYRKEENVVVFEYVPKGSLLYLLHGDRGPSHAELNWLTRLKIVQGIAEGLGYLYTELPSDLPHGNLKSSNILLGPSNEPLLMDFGYNSMVSSPCVRTQALFAYKAPEVVQGGQVSPKSDVFCLGVVILELLTGKYPAQYHSNGKGGFDVVQWIVTAISEERESELIDPEIAGSKNSVSEMVGLLHIGAGCTESNPENRLDLMEAIRRIRDIKPEGGKNFLSSLRNSYADSTNIQSG 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1517 659 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bisa10g1517 659 SUPERFAMILY Protein kinase-like (PK-like) 365 629 IPR011009 -
Bisa10g1517 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 635 IPR046959 -
Bisa10g1517 659 Gene3D Phosphorylase Kinase; domain 1 343 436 - -
Bisa10g1517 659 Coils Coil 286 317 - -
Bisa10g1517 659 Gene3D Transferase(Phosphotransferase) domain 1 437 649 - -
Bisa10g1517 659 ProSiteProfiles Protein kinase domain profile. 361 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1517 659 Pfam Protein kinase domain 365 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1517 659 SUPERFAMILY L domain-like 31 219 - -
Bisa10g1517 659 Gene3D Ribonuclease Inhibitor 32 146 IPR032675 -
Bisa10g1517 659 Gene3D Ribonuclease Inhibitor 148 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1517 Bisa-ChrBisa10 41692073 41694526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1517 13 634 Receptor kinase-like Gene Family AT3G42880 46.118 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa10g1517 Pkinase 1.8e-29 CL0016