Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1515 ATGTCGAAGTTTCCCGATGCGGCGGCCGAGGGCCAGAGGTCCGGCAGGGCGCCGGAGAGGTCCAATTTCACTCAGGCTTGCAATCTATTGGGCCAATTATTGAAGGAGAAGCGAGGGTCTGGAGCTTTGAACCTGGGGATGGCTGGGAAAATGGAATCTATAGCATCTCCGAAGGACTTGTCAACAAGCCTGCAAAATCCTGATAATACATTGAGACAAAATGCTTTGGCTATGGAATCTCTTCCTCAGTTTGTCGAAAACCCTTGCATCAAGAAGTCTGATACGAGGTCAGAGCCTGAAACTCCTCAATTGACAATATTTTATGCTGGAAAAGTGTTGGTGTTTGATGCTTTTGCCCCTGAGAAGGCCACGGAGATCATGGAGTTGGCCACCAAGTTAAGCTCTGATAGTCCTGATTCTGGCAATAACAAGAATCCCCCAAGTGCTTCTGCTGCTAAAGAAAATCTGGTTGTGGCTAAGGCACCTCAAAGCAACTCTGCCCAGGAAGTCCCTAGACCAGGATCTCAACCTATTAAATCAGACATGAGATATCCAAGAAGAGCTTCCCTCCTAAAATTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCCAAAGGACCTTACCAGCTGAACAATCCGAAGCAAGATGGAATTGGAAGCAGTTCTGGAGGTGACCCTGAAGATCAGTCTTCCAAATTCCTTGACCTTAACTTATAG 714 0.4678 MSKFPDAAAEGQRSGRAPERSNFTQACNLLGQLLKEKRGSGALNLGMAGKMESIASPKDLSTSLQNPDNTLRQNALAMESLPQFVENPCIKKSDTRSEPETPQLTIFYAGKVLVFDAFAPEKATEIMELATKLSSDSPDSGNNKNPPSASAAKENLVVAKAPQSNSAQEVPRPGSQPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNNPKQDGIGSSSGGDPEDQSSKFLDLNL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1515 237 MobiDBLite consensus disorder prediction 202 237 - -
Bisa10g1515 237 MobiDBLite consensus disorder prediction 132 184 - -
Bisa10g1515 237 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 218 IPR040390 -
Bisa10g1515 237 MobiDBLite consensus disorder prediction 212 237 - -
Bisa10g1515 237 Pfam tify domain 98 130 IPR010399 -
Bisa10g1515 237 ProSiteProfiles Tify domain profile. 97 132 IPR010399 -
Bisa10g1515 237 MobiDBLite consensus disorder prediction 1 23 - -
Bisa10g1515 237 MobiDBLite consensus disorder prediction 159 173 - -
Bisa10g1515 237 Pfam Jas motif 186 208 IPR018467 -
Bisa10g1515 237 MobiDBLite consensus disorder prediction 132 150 - -
Bisa10g1515 237 SMART tify_2 97 132 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1515 Bisa-ChrBisa10 41629281 41631552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1515 14 200 Tify Gene Family AT1G72450 33.333 6.59e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bisa10g1515 tify 1e-15 No_clan