Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1496 ATGGCCACCGCCACCGCAGCCGCCGCGCCGCCGCACCAGTTGTCGCAGAAGGAGGCTGACATCCAAATGATGTTGGCCGCCGAGGTCCATCTGGGAACCAAAAATTGCGATTTCCAGATGGAGAGATATGTCTTCAAGCGCCGCAATGATGGTATTTACATTATTAATCTCGGAAAAACATGGGAGAAGCTCCAGCTTGCTGCTAGGGTTATCGTTGCCATTGAGAACCCACAGGATATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCAGTTCTTAAGTTTGCTCAGTACACTGGCGCCCATGCAATTGCAGGAAGGCACACTCCAGGAACATTTACTAATCAGCTCCAGACATCCTATAATGAGCCTCGCCTTCTAATTCTCACTGATCCAAGAACAGATCATCAGCCTATCAAGGAAGCTTCTCTTGGAAATATACCAACTATTGCTTTCTGTGACACTGATTCTCCTATGCGATATGTTGACATTGGGATTCCTGCCAATAATAAGGGCAAGCATAGCATTGGTTGTCTATTTTGGCTTCTAGCAAGGATGGTATTGCAGATGCGAGGTACCATTCTTCCTGGGCACAAGTGGGATGTGATGGTTGATTTATTCTTCTATAGAGAACCTGAGGAGGCCAAGCAAGAAGAGGAAGATGAAGCAGCTCCTCTCCAAGATCATGCCATTGCTGATTTTAATGCTGCTGCTATGGGTGGCCTTCCGGTTGATGGCCAGTGGCCTGCTGCAATTGATCAATCATGGACTGAGGCAGCCCCACAACCTATTCCAGCAGTTCCTGCTGTTAACTGGACCCCAGAAGCTGTTGCTGGAGATTGGGGTGAACCTGTCGCTGCACCGCAAATAACTCCTTCCACTGTTGAATCTGTTCCTCCTTCTGGCTGGGAATAA 918 0.4847 MATATAAAAPPHQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQPIKEASLGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFYREPEEAKQEEEDEAAPLQDHAIADFNAAAMGGLPVDGQWPAAIDQSWTEAAPQPIPAVPAVNWTPEAVAGDWGEPVAAPQITPSTVESVPPSGWE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1496 305 ProSitePatterns Ribosomal protein S2 signature 2. 125 149 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 PRINTS Ribosomal protein S2 signature 100 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 PRINTS Ribosomal protein S2 signature 125 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 PRINTS Ribosomal protein S2 signature 51 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 PRINTS Ribosomal protein S2 signature 142 153 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 PRINTS Ribosomal protein S2 signature 163 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 Pfam Ribosomal protein S2 24 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 Pfam Ribosomal protein S2 121 188 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 ProSitePatterns Ribosomal protein S2 signature 1. 21 32 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 CDD RPS2 24 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa10g1496 305 SUPERFAMILY Ribosomal protein S2 16 206 IPR023591 -
Bisa10g1496 305 PANTHER 40S RIBOSOMAL PROTEIN SA 11 292 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa10g1496 305 NCBIfam 30S ribosomal protein S2 16 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa10g1496 305 Gene3D - 20 225 - -
Bisa10g1496 305 FunFam 40S ribosomal protein SA 20 226 - -
Bisa10g1496 305 Hamap 40S ribosomal protein SA [rps-0]. 8 252 IPR027498 GO:0003735|GO:0006412|GO:0015935
Bisa10g1496 305 MobiDBLite consensus disorder prediction 285 305 - -
Bisa10g1496 305 MobiDBLite consensus disorder prediction 291 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1496 Bisa-ChrBisa10 41234376 41236326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1496 4 305 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.395 2.27e-152 426