Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1482 ATGTGTGGAGGTGCTATCATCTCCGACTTGATTCCGGCGGCCGCGGTCAGCAACAGGAGGGCTCGCAAACTCACCGCAGACTATCTGTGGCCCGATTTGAAGAAGACCGGCGCCGGCAGGAGGTCCTCGAAGCCGCTGAGGTCCGAATTCGCCATCGACCTGGACGAGGATTTCGAAGCTGACTTCCGCAAATTCAAGGACGAATCCGACATCGACGACGACGAGGATGACGATTTGATGATCGATATTAAGCCCTTCACTTTCTCGGCCACCAAGCCCTCCAACAAGCCCCCGTCTGGCGGATCTGTGGCTGTGAAATCTGAGGAATCCGATGAGCAGTCTGAGAAGTCCTCAAAGAGGAGGAGGAAGAATCAATACAGGGGAATCCGCCAGCGTCCATGGGGCAAATGGGCAGCCGAGATCCGAGACCCGAGAAAGGGGGTTCGTGTCTGGCTCGGAACCTTCAACACCGCTGAAGAAGCTGCGAGGGCCTATGATGCTGAGGCCCGCAGGATCCGTGGCAAGAAAGCCAAGGTGAACTTCCCCGATGAGGTCTCAGGCACTTCCTCCAAACGTCTCAAGACAAATGTCGAGAAACAGCTTCCAAAAACAAATCTGAACTGTGCTCAGTCCAATGTGACCCAGAACTACAAAGTTGCCTCCAATCTGGATGACTGCTACTTCTCCATGGGTCTGATAGAGCAGAAACCACAGGTTAAGCAGTATGCTCCTGCTAACATGGGATCCTTCCCCGGCACTAACAACGGCCTCCCAGCTCTTTCACCATCTGATGATGTCACCCTGTATTTCAGTTCTGACCAGGCTAGCAACTCATTTGACTATTCTGATCTCGGATGGGGCGAACAGGGCCAGAAGACTCCAGAAATCTCATCCATGCTCTCTGATGAATCTTGCTATGTGGTGCCAGATGCCAACCAGACCAACAACCTGCAATTCTCAGACTCTCAGAATGTGGCATCCATGGAAAATGATTCCGCCAAGACCCTGTCTGAGGGTCTCGCAGACATTGAATCCCAGCTGAACTTCTTTCAGACTCCTTATCTCGGAGGGAACTGGGCTGACGCTTCATTTGACTCCCTGCTCAACGGGACTGCAACCCAGGATGCTGCAAACCCCATGAATCTCTGGACCTTTGCTGACCTTCCTTCTTCCCTCATGGGAGGAGCTTTCTGA 1194 0.531 MCGGAIISDLIPAAAVSNRRARKLTADYLWPDLKKTGAGRRSSKPLRSEFAIDLDEDFEADFRKFKDESDIDDDEDDDLMIDIKPFTFSATKPSNKPPSGGSVAVKSEESDEQSEKSSKRRRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEVSGTSSKRLKTNVEKQLPKTNLNCAQSNVTQNYKVASNLDDCYFSMGLIEQKPQVKQYAPANMGSFPGTNNGLPALSPSDDVTLYFSSDQASNSFDYSDLGWGEQGQKTPEISSMLSDESCYVVPDANQTNNLQFSDSQNVASMENDSAKTLSEGLADIESQLNFFQTPYLGGNWADASFDSLLNGTATQDAANPMNLWTFADLPSSLMGGAF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1482 397 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
Bisa10g1482 397 MobiDBLite consensus disorder prediction 88 128 - -
Bisa10g1482 397 FunFam Ethylene-responsive transcription factor 2 124 183 - -
Bisa10g1482 397 Pfam AP2 domain 125 174 IPR001471 GO:0003700|GO:0006355
Bisa10g1482 397 SUPERFAMILY DNA-binding domain 125 184 IPR016177 GO:0003677
Bisa10g1482 397 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Bisa10g1482 397 Gene3D AP2/ERF domain 124 183 IPR036955 GO:0003700|GO:0006355
Bisa10g1482 397 CDD AP2 125 183 IPR001471 GO:0003700|GO:0006355
Bisa10g1482 397 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Bisa10g1482 397 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Bisa10g1482 397 PANTHER DNA-BINDING DOMAIN 95 291 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1482 Bisa-ChrBisa10 40614142 40616393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1482 1 394 AP2-EREBP Transcription Factor Family AT3G14230 45.521 3.37e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g1482 AP2 2.1e-12 CL0081