Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1469 ATGGATTCTATCAACTCCTTCAAGGGCTACGATGAGGTAGATGAGCTCGAGCAGCAAGCCTATCGCAAGAAGACACGTAAGCGCATGATCATCCTCATCCTCTCCTCAATGGTATTCTTATCGGTGATTATCGCCGCCGTCGCAGGAACCGTCATACACAAGCGTAACACCTCGTCCTCTTCCGGTAACTCGGCTCCTTCCTTTGAGTTAACTCCGGCCGCGTCACTCAAAGCGGTCTGCAACTTGACTCAGTACCCCAACTCGTGCTTCTCTAGCATCTCCAGCGTCGCCAACAACACCACAGACCCCGAACTCCTCTTCAAGCTCTCTCTTCGCGTCGCCATTGACGGCCTCTCGAAGCTCAAGAAGTATCCTGTAAAGCTCAGAGCCAATGTCAATGATCCTCGGGAACAGAGGGCCATCGATGTCTGCGGATCTGTTTTTGACGATGCGGTAGATCGGCTCAACGAGTCGATCTCATCCTTGGAGGCCGGCGGCGGCGGAGGGAAGATTCTGTCGCCGGCGAAGATCGACGACATTAAGACGTGGCTGAGCGCGGCAATTACGAACCAGGAGACCTGTTTGGACGCAATCGAAGAGTTGAATTCCACCGCTGCGAATGAAATTCTTCAGGATTTGAGAAGCACCATGAGGAACTCCACAGAGTTCACGAGTAACAGCTTGGCGATTGTCACGAAGATTATCAGTCTGCTTGCGGACTTCAACATTCCGATCCATCGGAGGCTGCTTGGGTCGGACTCAGGGTTTCCGGAGTGGGTCGGACTCGCAGAGCGGAGGCTGTTGCAGCAGAAGAGGAATGAAACGAATCCGGATGCGGTGGTGGCGAAGGACGGCACCGGGCAGTACAAGACGATCAATGCGGCGGTTGCGGCGGTGAAGAAGAAGAGTGAAAGTAGGTTCGTGATTTATGTGAAGGAAGGCGTTTATGGGGAAAATGTGGATTTGGATAAGAACACATGGAATGTGATGATCATCGGAGATGGGAAAACCAAAACCATAATCTCCGGTGGCCGGAATAAAATCGACGGTACTCCCACTTTTGAGACTGCTACTTTTGCCGTGAAGGGGAAGGGATTCATAGCCAAAGACATAGGGTTCGTGAACGATGCAGGTCCATCCAAGCACCAAGCCGTGGCCATGAGGTCTGGCTCGGACCACTCTGTGTTCTACAGGTGCTCCTTTGAAGGCTTCCAGGACACCCTCTATGCCCATTCCAATCGTCAATTTTATCGTGACTGTGACATCACAGGCACCATAGACTTCATCTTTGGCAATGCAGCTTGTGTGTTCCAAAACTGCAACATCAAGCCCAGGCAGCCTTTGTCACAGCAGCTCGTCACCATCACAGCTCAGGGCAAGAAGGACCCAAACCAGAACACAGGGATCATAATCCACAAGTCTCTCATATCTGCACTTGATAATCTCACTGCTCCCACATACCTTGGTAGGCCTTGGAAGGACTATTCTACTACTGTGATCATGCAGTCTGATATTGGGCCATTCCTGAGCCCATTGGGCTGGACTGAATGGACCCCCAATGTGGAGCCCCCAAGCACTATATTTTATGCGGAGTATATGAATACTGGGCCGGGCTCCAATGTGACCCGACGGGTTAAATGGGCCGGGTATAGGCCCGGCCTCACAGAAGAGGAAGCAGGGAAGTTCACTGTTGAGGCATTTATACAAGGGAGTGAGTGGTTGCCAAATACTGCTGTGGAGTTTCAGCCCACTTTGTAA 1758 0.5176 MDSINSFKGYDEVDELEQQAYRKKTRKRMIILILSSMVFLSVIIAAVAGTVIHKRNTSSSSGNSAPSFELTPAASLKAVCNLTQYPNSCFSSISSVANNTTDPELLFKLSLRVAIDGLSKLKKYPVKLRANVNDPREQRAIDVCGSVFDDAVDRLNESISSLEAGGGGGKILSPAKIDDIKTWLSAAITNQETCLDAIEELNSTAANEILQDLRSTMRNSTEFTSNSLAIVTKIISLLADFNIPIHRRLLGSDSGFPEWVGLAERRLLQQKRNETNPDAVVAKDGTGQYKTINAAVAAVKKKSESRFVIYVKEGVYGENVDLDKNTWNVMIIGDGKTKTIISGGRNKIDGTPTFETATFAVKGKGFIAKDIGFVNDAGPSKHQAVAMRSGSDHSVFYRCSFEGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAACVFQNCNIKPRQPLSQQLVTITAQGKKDPNQNTGIIIHKSLISALDNLTAPTYLGRPWKDYSTTVIMQSDIGPFLSPLGWTEWTPNVEPPSTIFYAEYMNTGPGSNVTRRVKWAGYRPGLTEEEAGKFTVEAFIQGSEWLPNTAVEFQPTL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1469 585 Gene3D - 272 585 IPR012334 -
Bisa10g1469 585 FunFam Pectinesterase 72 235 - -
Bisa10g1469 585 SUPERFAMILY Pectin lyase-like 276 583 IPR011050 -
Bisa10g1469 585 SMART PMEI_2 71 230 IPR006501 GO:0004857
Bisa10g1469 585 NCBIfam pectinesterase inhibitor domain 63 233 IPR006501 GO:0004857
Bisa10g1469 585 Pfam Plant invertase/pectin methylesterase inhibitor 76 230 IPR006501 GO:0004857
Bisa10g1469 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 235 IPR035513 -
Bisa10g1469 585 FunFam Pectinesterase 272 585 - -
Bisa10g1469 585 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Bisa10g1469 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 234 IPR035513 -
Bisa10g1469 585 Pfam Pectinesterase 278 570 IPR000070 GO:0030599|GO:0042545
Bisa10g1469 585 PANTHER PECTINESTERASE 42 575 - -
Bisa10g1469 585 CDD PMEI-like_3 78 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1469 Bisa-ChrBisa10 40212723 40217935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1469 1 579 Carbohydrate Esterase AT1G53840 57.797 0.0 663