Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1468 ATGAGCAGACTCAAGCACGCCTTCACCGGAATATCCAATTCCGGCCCCGGCATTTCCACGTGCAAGATCAGGAACAAGAAGCTCCTCTTCCTCACTCTTCTCGTTCCTTTGGTCCTAGTCTCCGCCACTATCGGCATCATCGCCGGAGTTAACTCTCGGAAGAACTCCGTCGCCGGCGCCTCAGGTCTCCATTCCAACTCCGTCCATGCCATAGTCAAATCCGCCTGCAGTTCCACATTGTACCCCGAACTGTGCTTCTCCGCCATCGCAGACGAGCCCGGCCTCGCCGAGAAAGTCTCCACTCACAAAGACGTCATAGCACTGTCGCTAAACGTGACCATCAGAACCGTCCGACAGAATTACTTCACCGTCAAGAATCTCCAGACCAGAAAAAGACTCACCAAGAGAGAGAAAATCGCCCTCCACGATTGCCTCGAGATCATTGACGTCACCATAGACGAGCTTCACGTAGCCATCGCCGATCTTGGAAACATGACTCGCCACGGCGACGATCTCAAGACTCTCGTCAGTGCCGCCATAACTAACCAAGAGACCTGCCTGGACGGGTTCTCCCACAACCGCGTCGATAGGCGCGTGAGGGAAGGGCTCAGGGACGGGCACGCGCACGTGGAGCGCATGTGCAGCAACTCGCTGGCGATGATTTTAAACGTGACTGGTACGGAATCTTCAGTTAGTAACAGAAAAATGATGGAGGTGAAGGAAGATGAGAGCGGGATCAGGTGGCCGGAGTGGATGTCAGCGGCGGACAGGAGGATTCTACAGTTGACGACGGTGAATGCGAATACGGTGGTGGCGGGGGACGGGAGCGGGGACTACAAGACGGTGTCGGAGGCGGTGGCAGCAGCGCCGGAGCAGAGTAGCACGAGGTATGTTATATATATAAAAGCGGGGACGTATAGAGAGAACGTGGAAGTGCCAAAGACGAAGACGAATCTTATGTTTGTGGGAGATGGAAGAACGACGACTATCATAACTGGAAGTAGAAATGTCGTTGATGGAAGCACAACGTTTAACTCTGCCACTGTGGCCATAGTGGGAGAAGGATTCTTGGCCCGAGACATAACGTTCCAGAACACGGCGGGTCCGTCGAAGCAGCAGGCGGTCGCTTTGCGAGTGGGAGGCGACCTGTCGGCGTTCTACAGGTGCGACGTGCTGGCCTATCAGGACACCCTCTACGTCCACAGCAACCGCCAGTTCTTCGTCGGCTGCTTCATTGCCGGCACCGTCGACTTCATCTTCGGCAACTCCGCCGTCGTCTTCCAAGACTGCGACATCCACGCCCGCCGCCCCAACTCCGGCCAGAAGAACATGCTCACCGCGCAGGGAAGGACCGATCCTAACCAGAACACCGGCATTGTCATCCAAAACTGCAGGATTGGAGCCACCAAGGATCTGGAGGCAGTGAAGTCAAGCTTCCAGACGTACCTTGGGAGGCCATGGAAGGAGTACTCTCGGACTGTGGTGATGGAGACTTACATAAGTGACATAATAGACCCAGCTGGGTGGTACCCTTGGGAGGGTGACTTTGCATTGTCCACTTTGTTCTATGGAGAGTACCAGAACACTGGACCTCGTGCTGACACTTCTCAAAGGGTCACTTGGCCTGGCTTTAGGGTCATCACCAGTGCCACTGAGGCTGACGCCTTCACTCTTCAAAACTTCATTTCTGGTTCTAACTGGTTGTCCTCTACTGGCTTCCCATATGCTCTTGGCTTGTAA 1740 0.5477 MSRLKHAFTGISNSGPGISTCKIRNKKLLFLTLLVPLVLVSATIGIIAGVNSRKNSVAGASGLHSNSVHAIVKSACSSTLYPELCFSAIADEPGLAEKVSTHKDVIALSLNVTIRTVRQNYFTVKNLQTRKRLTKREKIALHDCLEIIDVTIDELHVAIADLGNMTRHGDDLKTLVSAAITNQETCLDGFSHNRVDRRVREGLRDGHAHVERMCSNSLAMILNVTGTESSVSNRKMMEVKEDESGIRWPEWMSAADRRILQLTTVNANTVVAGDGSGDYKTVSEAVAAAPEQSSTRYVIYIKAGTYRENVEVPKTKTNLMFVGDGRTTTIITGSRNVVDGSTTFNSATVAIVGEGFLARDITFQNTAGPSKQQAVALRVGGDLSAFYRCDVLAYQDTLYVHSNRQFFVGCFIAGTVDFIFGNSAVVFQDCDIHARRPNSGQKNMLTAQGRTDPNQNTGIVIQNCRIGATKDLEAVKSSFQTYLGRPWKEYSRTVVMETYISDIIDPAGWYPWEGDFALSTLFYGEYQNTGPRADTSQRVTWPGFRVITSATEADAFTLQNFISGSNWLSSTGFPYALGL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1468 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 221 IPR035513 -
Bisa10g1468 579 FunFam Pectinesterase 68 225 - -
Bisa10g1468 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 224 IPR035513 -
Bisa10g1468 579 Pfam Pectinesterase 268 564 IPR000070 GO:0030599|GO:0042545
Bisa10g1468 579 Pfam Plant invertase/pectin methylesterase inhibitor 71 220 IPR006501 GO:0004857
Bisa10g1468 579 NCBIfam pectinesterase inhibitor domain 65 223 IPR006501 GO:0004857
Bisa10g1468 579 ProSitePatterns Pectinesterase signature 1. 293 312 IPR018040 -
Bisa10g1468 579 PANTHER PECTINESTERASE 43 569 - -
Bisa10g1468 579 CDD PMEI-like_3 74 226 - -
Bisa10g1468 579 Gene3D - 262 579 IPR012334 -
Bisa10g1468 579 FunFam Pectinesterase 262 579 - -
Bisa10g1468 579 SMART PMEI_2 67 220 IPR006501 GO:0004857
Bisa10g1468 579 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Bisa10g1468 579 SUPERFAMILY Pectin lyase-like 263 578 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1468 Bisa-ChrBisa10 40203064 40208357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1468 24 579 Carbohydrate Esterase AT3G14310 62.457 0.0 704