Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1463 ATGGGTGATTCATTCACTCCAACTGAAAAATTGAGCGAATCTCCCGCCGTTGAAGTGACCGGAAAAATAATGGTGCTAGCTATAATAATCCTTTTCATGGTGGTTGTGTTTGTTCTCTTCCTCCACCTCTACGCCAAGTGGTTCTGGTGGCGCATTGAGGAACCCATTCCCCCGCCGCCTCGCCGCCGCCGTCGCCGGCGCTTTGTCTTCGCCCCCGGCCAAGATCCGGCGATTTACGGCTCTCAGAAAAGCGGCCTTGACCCTTCAGTGCTTTCGTCGTTACCAATACTAACATACCAGCCAGAAGATTTTAAAGAAGGTCTCGAATGTGCAGTCTGTCTCTCCGAGCTCGTTCAAGGAGAAAAAGCAAGAGTTCTACCCAAATGTAATCATGGATTTCACGTAGATTGTATTGATATGTGGTTTCAATCACATTCTACTTGCCCACTTTGTAGGAACCCCGTTGCTTCTGAGTCCTGTAACTCCAGTAGCACTCCAAGTGTTCGAGAAAATTCCTCTGAGAATACCAGTCAATCACAAGGAGCAGAAAATTCAGCTTCGGAGTCTCCAAATTTTCCAACTAATGTGTTAATTTGGGGAAACGAGACCCAAGTTAGTTCCACTGGTACTTCTCTGGAAGAACAGGATCCGTCATCTTCTTCATCTTCTTCTACTGCTACTACCAGTAGTAGTAATAGTAACAACAGACATCATGAAATGCTGGTGATTGATATGCCAAGTGAGGCCAATTCTTCATCTTTATCTCCTTCGGCAAGTAGATTTACAGAAGATGAGCTGAAATCACCAATGACAACGAGATTGAGATCATTGAAGAGGCTTCTGAGCAGAGACAGAAGGTTAGGTCCTTGTAATCATCCTGGCTCTTTAGATGTGGAACAAGCAGGGAGAGGTCAGAACTAG 921 0.4571 MGDSFTPTEKLSESPAVEVTGKIMVLAIIILFMVVVFVLFLHLYAKWFWWRIEEPIPPPPRRRRRRRFVFAPGQDPAIYGSQKSGLDPSVLSSLPILTYQPEDFKEGLECAVCLSELVQGEKARVLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVASESCNSSSTPSVRENSSENTSQSQGAENSASESPNFPTNVLIWGNETQVSSTGTSLEEQDPSSSSSSSTATTSSSNSNNRHHEMLVIDMPSEANSSSLSPSASRFTEDELKSPMTTRLRSLKRLLSRDRRLGPCNHPGSLDVEQAGRGQN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1463 306 FunFam RING-H2 finger protein ATL3 78 157 - -
Bisa10g1463 306 MobiDBLite consensus disorder prediction 266 286 - -
Bisa10g1463 306 MobiDBLite consensus disorder prediction 246 265 - -
Bisa10g1463 306 SMART ring_2 110 151 IPR001841 -
Bisa10g1463 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 158 IPR013083 -
Bisa10g1463 306 Pfam Ring finger domain 109 152 IPR001841 -
Bisa10g1463 306 CDD RING-H2_EL5-like 109 152 - -
Bisa10g1463 306 MobiDBLite consensus disorder prediction 159 306 - -
Bisa10g1463 306 SUPERFAMILY RING/U-box 90 156 - -
Bisa10g1463 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 18 266 - -
Bisa10g1463 306 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Bisa10g1463 306 MobiDBLite consensus disorder prediction 159 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1463 Bisa-ChrBisa10 40114058 40114978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1463 11 285 C3H Transcription Factor Family AT1G53820 43.333 4.09e-72 223