Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1457 ATGAAGGATCGGGGGCTTTTGCTGGTGGTGTTCATCAGCACCTGCATTCTGGGTTGGATGCTCATTGCTGTCGATGGAGCCACAGATCCAACTGATGCTGCTGCTTTAAAGGCTCTGTTTAATGGAATGAATTCACCATCTCAGCTTGGTTGGCCAGTTGAAAATGGTGATGATCCCTGTGGACAGTCTTGGAAAGGCATTACTTGTTCAGACAACCGAGTCACAGAGATTAAGTTAACTAATCTTGGACTATCTGGATCATTCGGTTACCAGTTACAAACCATGACATCTGTGACCAGCCTGGATATGAGTAACAACAATTTTGGAGGCAACATACCATACCAACTTCCTCCAAATTTGCAGAAATTAAATCTTGCCAACAATCAGTTCAATGGGGGTTTACCATATTCTATTTCTGATATGACTTCTCTTACGTACCTAAATGTTGCTCACAATCAGCTACAGAATGGATTGCCTGACGTGTTTCAAAAGCTTTCTTCCCTATCCACATTGGATCTCTCTTTCAATACTCTGTCAGGCGACCTCCCTCAGAGTTTCAGCTCACTTTCAAACATGAACAACATGTATCTGCAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCCAATCTACCTCTTGATACTCTAAATGTGGAAAACAACCGTTTCACGGGCTGGATACCTGAACAGTTGAAAGGCATTAACCTACAGACGACAGGTAATGCATGGAGCTCAGGCCCTGCACCCCCACCACCTCCTGGGACACCTCCTGCAACTAGAAGAAACCGGAATCACAAATCTGGTGGAAGCGACACCTCGTCAGATGATGGCTCTGGTGAAGGAGGCAAAAAATCTGGTATAGGAGCTGGTGGTATTGCTGGAATAGTGATATCCATCCTTGTTGTTGGGGCAATAGTAGCTTTCTTTTTGGTGAAAAGAAAATTCAGGAAGTCGTCCTCAGATATAGAAAAGCTTGATAACCAGCCCTTTGTTGCTCCTCTAAATTCAAGTGAAGTGCAAGAAGTGAAGTCTGTGCAAACTCCCTCTGTAGTTGATGTCAAGACGTTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGAACGTCACAAATCATTTGATGAAGATGAATTTTCCAAGAAGCCCATTACTGTCAAGAAAACTATAAAAGCTCCTGCAAATGTGAAATCATATTCTGTAGCAGACCTACAGATTGCCACCGGAAGCTTCAGTATGGATCACCTCCTTGGAGAGGGATCTTTTGGACGTGTTTACCGTGCTCACTTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCCCATGATTTGTCTGCAGAGTTTACTGAAATAGTTTCAAACATCTCCCATTTGCATCATCCAAATGTAACAGAGCTTGTTGGTTATTGTTCGGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAGAGTGGATCATTGCATGATTTTCTTCACTTAGCAGATGAATATAGCAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTCTAGAGTACCTACATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATCTTGCTTGATGCGGAGCTCAATCCTCATCTTTCTGACTCTGGATTGGCGAGCTATGTTCCAGATGCAGACCAGGTATTGAACCGTAATGCTGGATCTGGGTACGATGCACCTGAAGTTGCCTTGTCTGGCCAATATACTCTGAAAAGTGATGTCTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCACAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTGCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCTCTGGAGGGGCTATACCCTGTTAAGTCTCTTTCTAGGTTTGCCGACGTCATTGCTCTTTGCGTTCAGCCGGAGCCCGAATTCCGACCACCCATGTCAGAAGTGGTTCAAGCATTGGTTCGATTAGTTCAGCGAGCTAACATGAGCAAGAGGACATTTGGGACTACTGATCAGGGAGGATCCCAACGAGGAGGTGATGACCCAGACACACAAGATATGTAA 2160 0.4389 MKDRGLLLVVFISTCILGWMLIAVDGATDPTDAAALKALFNGMNSPSQLGWPVENGDDPCGQSWKGITCSDNRVTEIKLTNLGLSGSFGYQLQTMTSVTSLDMSNNNFGGNIPYQLPPNLQKLNLANNQFNGGLPYSISDMTSLTYLNVAHNQLQNGLPDVFQKLSSLSTLDLSFNTLSGDLPQSFSSLSNMNNMYLQNNQFTGTIDVLANLPLDTLNVENNRFTGWIPEQLKGINLQTTGNAWSSGPAPPPPPGTPPATRRNRNHKSGGSDTSSDDGSGEGGKKSGIGAGGIAGIVISILVVGAIVAFFLVKRKFRKSSSDIEKLDNQPFVAPLNSSEVQEVKSVQTPSVVDVKTFDTSASINLKPPPIERHKSFDEDEFSKKPITVKKTIKAPANVKSYSVADLQIATGSFSMDHLLGEGSFGRVYRAHFDDGKVLAVKKIDSSVLPHDLSAEFTEIVSNISHLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLADEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYVPDADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSTRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTTDQGGSQRGGDDPDTQDM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1457 719 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Bisa10g1457 719 ProSiteProfiles Protein kinase domain profile. 413 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1457 719 Gene3D Phosphorylase Kinase; domain 1 375 490 - -
Bisa10g1457 719 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 490 - -
Bisa10g1457 719 Pfam Protein tyrosine and serine/threonine kinase 415 685 IPR001245 GO:0004672|GO:0006468
Bisa10g1457 719 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Bisa10g1457 719 Gene3D Ribonuclease Inhibitor 29 250 IPR032675 -
Bisa10g1457 719 SUPERFAMILY Protein kinase-like (PK-like) 393 685 IPR011009 -
Bisa10g1457 719 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 491 699 - -
Bisa10g1457 719 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Bisa10g1457 719 MobiDBLite consensus disorder prediction 696 719 - -
Bisa10g1457 719 PANTHER LEUCINE RICH REPEAT KINASE 2 72 692 - -
Bisa10g1457 719 MobiDBLite consensus disorder prediction 239 284 - -
Bisa10g1457 719 CDD STKc_IRAK 419 688 - -
Bisa10g1457 719 Gene3D Transferase(Phosphotransferase) domain 1 492 705 - -
Bisa10g1457 719 MobiDBLite consensus disorder prediction 696 711 - -
Bisa10g1457 719 SUPERFAMILY L domain-like 28 232 - -
Bisa10g1457 719 Pfam Leucine Rich repeat 142 156 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1457 Bisa-ChrBisa10 40014191 40021597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1457 8 718 Strubbelig Receptor Gene Family AT1G53730 66.759 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bisa10g1457 PK_Tyr_Ser-Thr 3.2e-41 CL0016