Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1451 ATGTCCCTTTCTCCTTCTTCTTCTTCATCTTCATCTGCTTCTTCGTCTTCATTTTCTATGAAGAGAAAACCTCAAGACGCTGGCTTTCCTTTCTGGGCATCTGTTCTGATGACACAGGAAGCTCCCAGACAAAGACAAAGACCAACCCCATCAACATCTTCATCATCATCAGCAGCAAGAAGAAGACCCTCTTCCTCTTCCTCTGCTCCTTCTTATACTATTTTCATGGTTATGAAGTTAATGGTTTTTTTCATAGTACCGTTAGTTCTGTCTTGCTTCGTTGTTACTGTCTCATCCTCTTGTACCCAATCAGACAGAGACTCTCTCTTGGCCTTCGCTAGAAGTATTTCCCCTTACCCTCCTCTCAATTGGTCTGCTTCTGTTGACTGCTGCTCCTGGGAAGGCATTCTCTGCGATGATGAAAATAGAGAGAATGGGGATCAGCGAGTTATTCAGCTACTGCTTCCTTCCAGTGGTCTCACTGGCTCTATCTCCTCATCTCTCGCAAACCTTACTGCTCTCTCTCACCTCAATCTCTCCCATAATCGATTAGCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTCAATCACCTGCAGATTCTTGATTTAAGCTACAATCATCTCTCTGGTGAATTGCCAAACTGTGATGGTAATAACAGCAGTAGTAGTAATAGTAATCTCAAGGAGCTTGATTTGTCTAGCAATCTGTTTCGCGGAGCACTCCCATCTTCTTTCCTCCATCACCTAACAATTGCTGCTGCAGGAGGGACTTTGACATCTTTTAATGTTAGCAACAATAGCTTCACAGGTGAAATTCCCACTTCTCAACTTTGCATTAATGAGAGTGCTTCCTCTTCCTCCTCTCTCAGATTTTTGGATGTTTCCTCCAATGATTTCAATGGTTCAATTCAACCTGGATTGGGAGCATGTTCCAAGCTTGAGAGTTTCCGGGCAGGTTTCAATTTTCTATCTGGGCCTCTTCCTGGTGATCTCTTTGATGCTGTTTCCCTCAGAGAAATCTCCTTGCCCCTCAATAAACTCTCTGGGAATATTGATAATGGCATTGTTAATCTTACCAATCTCACAGTTCTGGAGCTCTACTCCAATGATTTCAAAGGTACCATCCCATGGGATATTGGTAAGCTATCCAAGCTGGAAAAGCTACTCCTTCATATCAACAATTTGACTGGTACTTTGCCTCCATCTCTGATGAACTGTGTCAATCTTGTCAAGTTAAACTTAAGGGTCAACCACTTGGATGGAGATCTCTCAGAATTCAATTTCTCCAGATTCCTCCAGCTTACTACGCTTGATCTTGGCAACAATAATTTTACCGGTAATTTACCAACAACCCTTTATGCATGCAAGTCTCTAGCTGCAGTAAGGTTAGCATTTAATAATCTTGAGGGACAGATCACCCCAGACATACTTGGACTTGAGTCTCTGTCTTTCTTATCAATATCTACCAACTATCTAAGAAATTTCACAGGAGCCATGAAGATACTCACAGGGCTCAAGAACCTTAGTACCCTTGCCCTCTCCAAGAATTTTTACAGTGAAGCCATGCCGAATGATGAGAACTTAATAGGCCCAGATGATTTTCAGAAACTACAAGTTCTAGGTTTGGGTGGTTGTAATTTCACAGGTGAAATACCAGGCTGGCTTGCAAAGCTGAAGAATCTGGAGGTCATTGACCTGTCCTATAATCTAATCACTGGTCCACTTCCTCCTTTGTTGGGCACACTTCCTCAGCTTTTCTACATAGACTTGTCTTATAACCGGTTTACGGGAATATTTCCCACTGAGCTCACAAGAATCCCAGCATTAACATCACAACAGGCAAATGATAAAATAGAAAGATCTTACCTGGAGTTACCTGTCTTCATTGTGCCGAACAATGCTTCTGAGCAGCAATATAATCAGCTTTCCAACCTACCACCAGCGATATATCTGAGAAACAACAGCCTCAGTGGTAGTATCCCCATAGAGATTGGCCTAATGAAAGTCCTTCATCAGCTGGATCTGGGTAATAATAACTTTTCTGGCAGTATTCCAGTTCAGATTTCTAACTTGACTAACTTAGAGAGGTTAGACCTCTCAGGAAACCGACTATCTGGCGAAATTCCTGAGTCACTCAAAAGCTTGCATTTCTTGTCATATTTCACTGTGGCAGACAATAATCTTCAAGGACAGATACCAACTGGTGGTCAGTTTGATACTTTCCCAGCTTCCAGCTTTCAAGGAAACCAACAATTGTGTGGTGGAGCTGTTCAACGCTCTTGTCCTAGTCCACAAAGTGATACTGCAACTCGTCGCAGCTCGACCAAAAAAATAATGATTGGACTTGTCATTGCGATTTGTTTTGGCACTGTTTCTATCATGATTGTGCTGACTATCTGGATACTTTCCAAGAGGAGGATCAATCCAGGAGGAGATCCTGACAAGATTGAACTGGAATCGATTTCTGCAAACTCCAACAGTGGGGTTCATCCAGAGGTTGATAAAGAGGCTAGCCTAGTGGTATTGTTCCCCAATAAAAAAAATGAAATTAAGGATCTTACTATATCTGAAATCCTAAAAGCCACTGAAAATTTCAGTCAAGCAAACATAATAGGATGCGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCAGATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGGCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCAACACGAAAATCTGGTTGCATTGCAAGGTTACTGTGTGCACGATGGCTTTCGGCTTCTAATATATACTTACATGGAAAATGGAAGTCTGGATTATTGGCTGCATGAAAAGGCTGATGGTGCATCTCTACTTGATTGGCCGACTCGACTAAAGATAGCACAGGGTGCGAGTTGTGGGTTGGCTTACATGCATCAAATATGCGAGCCACACATTGTGCATCGAGATATAAAATCAAGCAATATCCTCCTTAATGCAAAGTTTGAGGCACATGTTGCTGATTTCGGGCTATCCCGGCTGATCCTTCCTTATCAGACTCATGTCACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCTGAGTATGGACAAGCATGGGTGGCCACTCTCAGGGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTACTCACTGGGAGGAGGCCTGTTGACATATGCAAGCCAAAGATGTCGAGGGAATTGGTTGGATGGGTGCAACAGATGAGGTGTGAAGGAAAACAAGATGAGGTCTTCGACCCCCTTCTGAGAGGGAAGGGCTTTGAAGAGGAGATGCTGCAGGTCCTTGATGTGGCCTGCATGTGTGTCAACCAGAATCCTTTCAAGAGACCAAGCATCAAAGAAGTTGTTGATTGGCTGAAGAATGTAGGATCGGCCAAACAATACCAGAATAAAGACTAG 3453 0.4304 MSLSPSSSSSSSASSSSFSMKRKPQDAGFPFWASVLMTQEAPRQRQRPTPSTSSSSSAARRRPSSSSSAPSYTIFMVMKLMVFFIVPLVLSCFVVTVSSSCTQSDRDSLLAFARSISPYPPLNWSASVDCCSWEGILCDDENRENGDQRVIQLLLPSSGLTGSISSSLANLTALSHLNLSHNRLAGNLPTQFFSLLNHLQILDLSYNHLSGELPNCDGNNSSSSNSNLKELDLSSNLFRGALPSSFLHHLTIAAAGGTLTSFNVSNNSFTGEIPTSQLCINESASSSSSLRFLDVSSNDFNGSIQPGLGACSKLESFRAGFNFLSGPLPGDLFDAVSLREISLPLNKLSGNIDNGIVNLTNLTVLELYSNDFKGTIPWDIGKLSKLEKLLLHINNLTGTLPPSLMNCVNLVKLNLRVNHLDGDLSEFNFSRFLQLTTLDLGNNNFTGNLPTTLYACKSLAAVRLAFNNLEGQITPDILGLESLSFLSISTNYLRNFTGAMKILTGLKNLSTLALSKNFYSEAMPNDENLIGPDDFQKLQVLGLGGCNFTGEIPGWLAKLKNLEVIDLSYNLITGPLPPLLGTLPQLFYIDLSYNRFTGIFPTELTRIPALTSQQANDKIERSYLELPVFIVPNNASEQQYNQLSNLPPAIYLRNNSLSGSIPIEIGLMKVLHQLDLGNNNFSGSIPVQISNLTNLERLDLSGNRLSGEIPESLKSLHFLSYFTVADNNLQGQIPTGGQFDTFPASSFQGNQQLCGGAVQRSCPSPQSDTATRRSSTKKIMIGLVIAICFGTVSIMIVLTIWILSKRRINPGGDPDKIELESISANSNSGVHPEVDKEASLVVLFPNKKNEIKDLTISEILKATENFSQANIIGCGGFGLVYKATLPDGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKADGASLLDWPTRLKIAQGASCGLAYMHQICEPHIVHRDIKSSNILLNAKFEAHVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDICKPKMSRELVGWVQQMRCEGKQDEVFDPLLRGKGFEEEMLQVLDVACMCVNQNPFKRPSIKEVVDWLKNVGSAKQYQNKD 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1451 1150 ProSiteProfiles Protein kinase domain profile. 866 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1451 1150 ProSiteProfiles Leucine-rich repeat profile. 694 716 IPR001611 GO:0005515
Bisa10g1451 1150 FunFam Leucine-rich repeat receptor-like protein kinase 942 1148 - -
Bisa10g1451 1150 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Bisa10g1451 1150 Pfam Leucine Rich repeat 197 212 IPR001611 GO:0005515
Bisa10g1451 1150 SMART LRR_typ_2 226 248 IPR003591 -
Bisa10g1451 1150 SMART LRR_typ_2 196 220 IPR003591 -
Bisa10g1451 1150 SMART LRR_typ_2 383 407 IPR003591 -
Bisa10g1451 1150 SMART LRR_typ_2 432 456 IPR003591 -
Bisa10g1451 1150 SMART LRR_typ_2 559 583 IPR003591 -
Bisa10g1451 1150 SMART LRR_typ_2 692 716 IPR003591 -
Bisa10g1451 1150 SMART LRR_typ_2 171 195 IPR003591 -
Bisa10g1451 1150 Gene3D Ribonuclease Inhibitor 334 427 IPR032675 -
Bisa10g1451 1150 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 329 424 - -
Bisa10g1451 1150 FunFam Tyrosine-sulfated glycopeptide receptor 1 429 767 - -
Bisa10g1451 1150 Gene3D Transferase(Phosphotransferase) domain 1 942 1150 - -
Bisa10g1451 1150 Pfam Leucine Rich Repeat 694 716 IPR001611 GO:0005515
Bisa10g1451 1150 SUPERFAMILY L domain-like 100 327 - -
Bisa10g1451 1150 MobiDBLite consensus disorder prediction 1 22 - -
Bisa10g1451 1150 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Bisa10g1451 1150 SMART serkin_6 866 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1451 1150 PRINTS Leucine-rich repeat signature 692 705 - -
Bisa10g1451 1150 PRINTS Leucine-rich repeat signature 199 212 - -
Bisa10g1451 1150 FunFam Leucine-rich repeat receptor-like kinase 107 227 - -
Bisa10g1451 1150 SUPERFAMILY Protein kinase-like (PK-like) 851 1137 IPR011009 -
Bisa10g1451 1150 Pfam Leucine rich repeat N-terminal domain 103 139 IPR013210 -
Bisa10g1451 1150 SUPERFAMILY L domain-like 259 612 - -
Bisa10g1451 1150 Gene3D Ribonuclease Inhibitor 104 223 IPR032675 -
Bisa10g1451 1150 Gene3D Ribonuclease Inhibitor 224 278 IPR032675 -
Bisa10g1451 1150 Gene3D Ribonuclease Inhibitor 279 333 IPR032675 -
Bisa10g1451 1150 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 324 1137 - -
Bisa10g1451 1150 Gene3D Ribonuclease Inhibitor 428 770 IPR032675 -
Bisa10g1451 1150 Pfam Protein kinase domain 867 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1451 1150 ProSitePatterns Serine/Threonine protein kinases active-site signature. 988 1000 IPR008271 GO:0004672|GO:0006468
Bisa10g1451 1150 MobiDBLite consensus disorder prediction 1 24 - -
Bisa10g1451 1150 ProSitePatterns Protein kinases ATP-binding region signature. 872 895 IPR017441 GO:0005524
Bisa10g1451 1150 Gene3D Phosphorylase Kinase; domain 1 828 941 - -
Bisa10g1451 1150 MobiDBLite consensus disorder prediction 39 68 - -
Bisa10g1451 1150 SUPERFAMILY L domain-like 639 754 - -
Bisa10g1451 1150 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 834 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1451 Bisa-ChrBisa10 39780401 39783853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1451 80 797 Miscellaneous Gene Families AT1G17240 51.243 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa10g1451 Pkinase 6e-39 CL0016