Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1443 ATGGAATTGCTGATGCAAGAAGTAAAAGGCCATTCTGATGAGAGAGAATTAGAAGAGGAAGAGGAAGAAGAAGAATTAGAAGAAGAAGAAGCAGAGATTACCAAAGAGGAAAGCAGCTCCAGCAAGCAATACTACCCTTTCTTCTCCACTCGTCAAAATTCATGGTTGGGGCTTCATGATCGTCATTCTCCCGACGCCACCACCACCACCACCACCGATTCCTACAATTCATCCTCCGGAACACGGCTACCATCAGCTCCCACCGCGAATTTCTTCAATAACCACTGCAAGCCAGACCTCATGGACCTCTCTCTGGGAATCGAGAACAGAAACATTAAAGACCTAAATGAGGAGGAGGAAGAAGAAGGCAATTTGCAGGCACCAGGAAGCAGCGCCACGAACGACGTCGTTTTGGCGATCGAGAAGGAGCACATGTTCGATAAAGTCGTTACGCCCAGTGACGTAGGCAAGCTCAACCGCCTCGTGATACCGAAGCAGCACGCGGAAAAGTACTTCCCTCTCGATTCGTCCTCCAACGAGAAAGGCCTGCTCCTCAATTTCGAGGACCGTAACGGCAAGCTATGGCGCTTCCGGTACTCCTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAGGGATGGAGCCGATTCGTCAAGGAGAAGAAGCTCGATGCCGGCGACATTGTCTCATTCCAGCGCGGCTCCGGTGAGCCCCACCGCCATATGTTGTACATAGATTATAGGCGTAGACCTGATCACGGACCGGCCGGGAGCACCGATCCGAGTTTGATTGCACCTTTTCTTCTCCATCAGCCGCAGTTTTCCCTCGGCTGGGGCGGCCGCTTCTACTCGCTACCATCGCTGCCGCCACCGCCGATGCGGCCCACGACGCAGGTGAATTACAGTAATATGTTTTCGTTTCATCGACAACAACAACACAATGAGCAGTATCATCATAATCATCATCATCAACATCACCCATGGCAGCAGCAGCAGCATTTTCATTATAATGCGATGAACTCGGTATCTGGATCAGTGTATCAGAACTTGATAAGGCAACATGAGGGAGGAAATGGAAATGAAAATGGAAATGACAATAGAAATGTTCCAATGATCATCAATTCTGTACCGGTTGATAATTATTACCAACGTCATCTTCGTTATCATCATCATCATCACCATAGTAGTGGCACTCATAATACTACTACTACTACTACAGCAGGGAAAACGCTTAGGCTATTTGGTGTCAACATGGAATGTGATACTGCTGCATCTTCTGCTTCTTCTCTTTCAGAAGAACCCAAATGTTGTAATGTGATCACAGCAATGGCTAATTCTTCATCATCATCATCGGCACTTCCTCCACCTCTCCAGTATTTGAGGGTAGCTCACGAAGATCCAATATCGGCGAGGTTTCAGAATCATCATCATCAGAGAGGAGAAACTTCGATGCTTTTTGATTTGGATCCCTCTTTGCAATACAAGCACTGA 1491 0.4782 MELLMQEVKGHSDERELEEEEEEEELEEEEAEITKEESSSSKQYYPFFSTRQNSWLGLHDRHSPDATTTTTTDSYNSSSGTRLPSAPTANFFNNHCKPDLMDLSLGIENRNIKDLNEEEEEEGNLQAPGSSATNDVVLAIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGSGEPHRHMLYIDYRRRPDHGPAGSTDPSLIAPFLLHQPQFSLGWGGRFYSLPSLPPPPMRPTTQVNYSNMFSFHRQQQHNEQYHHNHHHQHHPWQQQQHFHYNAMNSVSGSVYQNLIRQHEGGNGNENGNDNRNVPMIINSVPVDNYYQRHLRYHHHHHHSSGTHNTTTTTTAGKTLRLFGVNMECDTAASSASSLSEEPKCCNVITAMANSSSSSSALPPPLQYLRVAHEDPISARFQNHHHQRGETSMLFDLDPSLQYKH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1443 496 MobiDBLite consensus disorder prediction 1 15 - -
Bisa10g1443 496 ProSiteProfiles B3 DNA-binding domain profile. 146 248 IPR003340 GO:0003677
Bisa10g1443 496 FunFam B3 domain-containing protein 139 259 - -
Bisa10g1443 496 MobiDBLite consensus disorder prediction 16 34 - -
Bisa10g1443 496 Coils Coil 1 39 - -
Bisa10g1443 496 MobiDBLite consensus disorder prediction 1 44 - -
Bisa10g1443 496 SUPERFAMILY DNA-binding pseudobarrel domain 143 247 IPR015300 -
Bisa10g1443 496 CDD B3_DNA 144 233 IPR003340 GO:0003677
Bisa10g1443 496 SMART B3_2 146 246 IPR003340 GO:0003677
Bisa10g1443 496 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 38 430 IPR044800 GO:0003700
Bisa10g1443 496 MobiDBLite consensus disorder prediction 474 496 - -
Bisa10g1443 496 MobiDBLite consensus disorder prediction 56 87 - -
Bisa10g1443 496 Pfam B3 DNA binding domain 146 239 IPR003340 GO:0003677
Bisa10g1443 496 Gene3D - 139 255 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1443 Bisa-ChrBisa10 39535810 39537300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1443 117 420 RAV Transcription Factor Family AT2G46870 46.129 1.11e-69 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa10g1443 B3 4.5e-28 CL0405