Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1441 ATGGAGGATGGGAGTACAAGGGTTTCGGGAGCAGGTGAGGATGACTCAGTGGTAACTCGCTCCTCTCCCTCCTACTGGCTGGACGCCTGCGAGGACATTTCCTGCGACCTTATTCACTTCGACGATGGGTCTATCGTCTCGGACCAGGTCGATAACAATTTGATACAGGATGGACTTGTGAATGATTTCTTCGGCGGGATTGATCACATTCTCGACAGTATTAAGAACGGCAGTGGCCTCCCTGTGGCCACTGAGAGCAATTCCATTCTCAATGGGAATGAAAACCACGACGGCGCGTTTGCTTTGCAAGCTGAAATCTCCGATCAGAAGGATAGTTTTGTGAAGAATGGATCGGCTGGCGAAAAACATGGTCGTGCAATTGAAGTTTATGAGGGTTCAGGAGCTGAAGGTAATGGATACAAGCCATCAATTGGCAATGAAGAAGGGAAAACTATGGGTGATTCTAAGGAAAATGGAGATGGTGATCTATGTGGGGAGCATCATGTGGATGGTGAAGAAAGGTTCGGCAAGAGAGCTAGGCTAGGTAACTATAAGAATGAGAGGCTTTATCCTGGCAGAGTGAATTATCATCCCAAGGAGAGGGAGAGGGGTCTCAATAGGAAGAGGCCCCGGGAATGGGATGAGGTTGATAGGAAAGAAAAAGATAGTGGGAGGAAAAGAGAAAATTATGGTAGTTGTGGTAGGAGGGATGTTAGAGATAGGGATTGGAGGGATAGAGAAAAGGGTTATTGGGAGAGGGATAAGTTAGGTTCCAATGACATGGTCTTTCGCTTAGGCACTTGGGAAGCTGACCGCAACCGAGAAGGAAAGTTGGCTAATGACATTAAACAGGAAAGCAATGGAAAGGTTGAGACGAACACTGAGGAGCCTAAGGAGAGAGTTCCTGAGGAACAAGCTAGGAAGTACCAGTTGGATGTACTTGAGCAGGCAAAGCAGAAAAATACTATAGCTTTTCTTGAAACTGGAGCAGGGAAGACCCTCATTGCTGTTCTTCTCATTAAAAGTATACATGAGAGTTTACAGAAGCAGAATAAAAAGATGCTTGCAGTATTTTTAGTTCCCAAAGTTCCCCTTGTTTACCAGCAAGCAGAAGTAATTCGAGAGCGAACTGGCTACCAAGTGGGCCACTACTGTGGAGAAATGGGGCAGGACTTTTGGGATGCTCGAAGGTGGCATCGTGAATTTGAAACAAAACAGGTTCTAGTCATGACAGCTCAAATTCTTTTGAACATTCTGAGGCACAGCATTATAAAAATGGAAACAATCAATCTCCTGATTCTGGATGAGTGTCATCATGCTGTCAAGAAACATCCTTATTCACTGGTGATGTCCGAATTCTATCATACAACACCCAAAGAGAAGAGACCATCTGTGTTTGGAATGACTGCTTCTCCTGTTAACTTGAAGGGTGTGTCTAGCCAGGTGGATTGTGCAATAAAAATTCGTAATCTTGAAAGTAAGCTAGATTCTATAGTTTGTACCATTAAGGATCGTAAGGAGCTGGAGAAACATGTACCAATGCCCTCTGAGGTTGTGGTGGAGTATGACCAAGCAGCCAGTCTATGTTATCTTCATGAGCAAATAAAGCAAATGGAAATTGAAGTTGAAGAAGCTGCTAAGTCAAGTTCAAGAAGAAGTAAATGGCAGTTTATGGGAGCTAGAGATGCTGGAGCCAAAGAAGAGCTACGTCAAGTATACGGTGTTTCTGAAAGAACAGAAAGTGATGGGGCTGCAAACCTAATTCAGAAGTTGAGAGCTATCAATTATGCACTTGGTGAACTGGGTCAGTGGTGTGCATACAAGGTTGCACATTCTTTTCTATCAGCTTTGCAAAATGATGAGAGGGCAAACTATCAACTTGATGTCAAGTTTCAAGAATCCTATCTGAATAAAGTTGTCTCTCTTCTACAATGTCAACTGTCAGAGGGCGCAGTTTCTGACAAGAATGCCGGAGTTTGTGACTCAGAGTGTGGTGTGGCACAGAGTGGGTCTGAACCTGCTGAGATTGAAGAAGGAGAGCTTCCAGACAGTCATGTTGTCTCTGGAGGGGAGCATGTGGATGTCATAATAGGAGCTGCTGTGGCTGATGGCAAGGTGACCCCCAAGGTGCAGGCTCTGATCAAAATACTTCTCAAGTATCAGCACACAGAAGACTTCCGTGCAATCATCTTTGTTGAGCGTGTTGTGTCTGCTTTAGTTCTACCGAAGGTTTTTGCAGAGCTTCCATCTCTAAGTTTTGTCAAGTGTGCAAGCTTGATTGGTCACAACAATAGTCAGGAAATGAGGACCTCGCAGATGCAGGATACAATTTCAAAGTTCCGTGATGGCCGAGTAACATTGTTAGTTGCCACTAGTGTTGCTGAAGAAGGACTTGATATACGGCAATGCAATGTTGTTATCCGCTTTGACCTCGCAAAGACAGTTTTGGCATACATTCAGTCTAGAGGCCGTGCTAGAAAGCCTGGGTCTGACTACATCCTGATGGTTGAGAGGGGAAATTTGTCGCATCAAGCATTTCTAAGGAATGCCAGGAATAGTGAGGAGACTTTGCGGAGAGAAGCAATAGAGAGAACAGACCTAAGTCATCTTAAAGATACTTCGAGGTTGATTTCAGTAGATACTAGACCAGGAACTGTTTACCAGGTGGAGTCAACTGGTGCTGTTGTGAGCTTAAATTCTGCTGTAGGTCTTATCCACTTTTACTGCTCTCAGCTACCTAGTGACAGATATTCAATTCTTCGTCCTGAGTTTATTATGGAGAAGCATGAAAAACCGGGAGGTCCCACTGAGTATTCTTGCAAGCTTCAACTGCCGTGTAATGCGCCTTTTGAAAATCTTGAGGGTCCCATATGCAGTTCAATGCGCCTTGCACAACAGGCTGTTTGTCTGGCTGCTTGTAAGAAACTGCATGAGATGGGAGCATTCACTGACATGTTATTGCCTGACAAAGGAAGTGGGGAAGAAAGAGAGAAGGCTGAGCAAAATGATGAAGGAGATCCACTTCCAGGGACTGCTAGACACAGAGAGTTCTATCCTGAAGGTGTGGCGGATATACTAAAGGGAGAATGGATCTTATCTGGAAAAGATTCTTGCAGCAACGCGAAATTGCTTCATCTTTATATGTATGCTGTTAAGAGTGAAAACATAGGCCATTCAAAGGATCCGTTCTTGACTCAAGTTTCAGATTTTGCAGTGCTTTTTGGCAATGGGCTGGATGCAGAGGTGTTATCGATGTCAATGGATCTATTTATCGCACGAACCATGACTACAAAGGCATCCCTTGTCTTTAGAGGGTCAATAGATATCACTGAGAGGCAGTTGGCATCCCTAAAAAGCTTTCATGTTAGATTAATGAGCATTGTCCTGGATGTGGATGTTGAACCTTCCACCACTCCTTGGGATTCTGCAAAAGCATATTTGTTTGTCCCAATGGTTGGCGATAAGTCTTTAGATCCTATGAACCAAATTGACTGGCATCTGGTTGAGACAATAATTAAAACAGATGCATGGAAAAATCCACTTCAGAGAGCTCGACCAGATGTTTACCTTGGTACAAATGAAAGAACATTAGGTGGAGATAGACGGGAATATGGATTTGGGAAATTGCGTCATGGCATGGCTTTTGGACAAAAATCACATCCAACCTATGGAATCAGGGGAGCTGTGGCACAGTTTGATGTGGTAAAAGCTTCAGGATTGGTTCCTATTAGAGAAGCCATGCAAATGCAAAAGAATACGAGTAAGACTGCCCAAGGGAAATTGATGATGGCAGATACCTGTACTAATGCAGAGGATCTGGTAGGGAGAATAGTTACAGCTGCTCACTCAGGGAAAAGGTTTTATGTTGATTCAATACGCTATGATATGACTGCAGAGAACTCTTTTCCTAGAAAAGAAGGCTATCTTGGTCCTCTGGAGTACAGCTCATATGCTGATTACTACAAGCAAAAGTATGGAGTTGATTTAATTTACAAGCAGCAACCTCTTATTAGGGGCCGTGGTGTATCATACTGCAAGAATCTTTTGTCACCTCGATTTGAACATAGTGAGACGCATGAAGGTGAATCTGAAGAGGCTCATGACAAAACTTATTATGTTTTCCTTCCTCCTGAGTTGTGCCTTGTACACCCACTGCCTGGATCACTTGTTCGTGGTGCCCAAAGGTTGCCTTCAATAATGAGGAGGGTTGAAAGTATGCTACTTGCAATTCAACTTCAAAATATGATAAATTATCCTGTCCATTCTTCCAAGATCTTGGAGGCCTTGACTGCTGCCTCCTGTCAGGAGACATTCTGCTATGAAAGGGCGGAGCTTCTAGGAGATGCTTACCTGAAATGGGTTGTTAGTAGATTTCTTTTCCTAAAATACCCACAGAAACATGAGGGCCAGCTTACGAGGATGAGGCAACAAATGGTCAGTAACATGGTATTATATCATTATGCGTTGAGCAAAGGACTTCAATCTTATATTCAAGCAGATCGCTTTGCGCCATCCAGATGGGCAGCTCCAGGGGTGCTGCCTGTCTTTGATGAGGATACAAAAGATGGAGAATCATCTTTATTTGACCAGGAGGGATTGATTACTAAGACCGAGAGGATGGATCACCTCACTGATGGATTTGAGGATGATGAATTGGAAGATGGCGAGCTTGAGAGTGACTCAAGTTCTTATAGAGTCCTATCCAGCAAGACACTTGCAGATGTTGTAGAAGCTCTGATTGGAGTGTATTATGTTGAAGGGGGGAAAAATGCTGCTAATCATCTTATGAAATGGATTGGCATTCAGATAGAGTTTGATCCTGATTGGATGGAGTGTACTAGAAAGCCAAGTAATGTTCCAGAGACTATACTTAGGAGTGTTGACTTTGATGCTTTGGAAGGTGCATTGAATATCAAGTTTAGTGACAAGGCGCTCCTCGTAGAAGCCATAACTCATGCCTCAAGACCATCTTCAGGAGTATCCTGTTATCAGCGGTTGGAGTTTGTTGGTGATGCCGTTTTGGATCATCTCATTACCAGACACTTGTTTTTCACTTACAAAGATCTGCCACCGGGACGTCTGACTGACCTTCGGGCTGCTGCTGTAAACAATGAAAACTTTGCACGTGTTGCAGTTAAACATGGTCTTCATGTACATCTTCGACATGGGTCCAGTGCCCTAGAAAAGCAGATTACAGAATTTGTGAAGGAAGTTCAAGATGAATTGTCTAAGCCAGGGTTTAACTCCTTTGGCTTGGGAGACTGCAAAGCTCCCAAGGTCCTCGGTGACATTGTTGAATCTATTGCTGGTGCCATTTTTCTTGACAGTGGGCGGGATACTGCTGTTGTTTGGAAGGTTTTCCAGCCTCTTTTGCATCCCATGGTTACCCCGGAGACTCTGCCAATGCATCCTGTGCGTGAGCTACAAGAACGATGCCAGCAGCAAGCAGAAGGCCTAGAATATAGAGCGTGTCGAATTGGCAATTTGGCTACTGTGGAAGTATTCATCGATGGTGTGCAAGTAGGGGCTGCTCAGAATCCCCAAAAGAAAATGGCACAGAAATTAGCTGCCAGAAATGCCCTTGCTGCTTTGAAAGAGAAGGAGGTAGCAAAAACTAAGGAGAAGGATGATGAAAATGGCAAGAAAAAGAAGAACGGAAACCAGACATTCACCAGACAGACACTGAATGATATCTGTTTGCGGAGAAACTGGCCTATGCCGTTCTACCGGTGTGTGAATGAGGGTGGTCCAGCACATGCAAAGAGGTTCACTTTTGCGGTTCGGGTCAATACTACCGATAGGGGATGGACAGATGAATGTGTGGGAGAACCAATGCCAAGTGTGAAGAAAGCCAAGGATTCTGCTGCTGTTCTTCTCTTAGAACTACTAAATAAGTTATACTCGTGA 5907 0.4408 MEDGSTRVSGAGEDDSVVTRSSPSYWLDACEDISCDLIHFDDGSIVSDQVDNNLIQDGLVNDFFGGIDHILDSIKNGSGLPVATESNSILNGNENHDGAFALQAEISDQKDSFVKNGSAGEKHGRAIEVYEGSGAEGNGYKPSIGNEEGKTMGDSKENGDGDLCGEHHVDGEERFGKRARLGNYKNERLYPGRVNYHPKERERGLNRKRPREWDEVDRKEKDSGRKRENYGSCGRRDVRDRDWRDREKGYWERDKLGSNDMVFRLGTWEADRNREGKLANDIKQESNGKVETNTEEPKERVPEEQARKYQLDVLEQAKQKNTIAFLETGAGKTLIAVLLIKSIHESLQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWHREFETKQVLVMTAQILLNILRHSIIKMETINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEYDQAASLCYLHEQIKQMEIEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAHSFLSALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVSDKNAGVCDSECGVAQSGSEPAEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTSQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHQAFLRNARNSEETLRREAIERTDLSHLKDTSRLISVDTRPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMEKHEKPGGPTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDSCSNAKLLHLYMYAVKSENIGHSKDPFLTQVSDFAVLFGNGLDAEVLSMSMDLFIARTMTTKASLVFRGSIDITERQLASLKSFHVRLMSIVLDVDVEPSTTPWDSAKAYLFVPMVGDKSLDPMNQIDWHLVETIIKTDAWKNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPIREAMQMQKNTSKTAQGKLMMADTCTNAEDLVGRIVTAAHSGKRFYVDSIRYDMTAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYKQQPLIRGRGVSYCKNLLSPRFEHSETHEGESEEAHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLQNMINYPVHSSKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYHYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLFDQEGLITKTERMDHLTDGFEDDELEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQIEFDPDWMECTRKPSNVPETILRSVDFDALEGALNIKFSDKALLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYKDLPPGRLTDLRAAAVNNENFARVAVKHGLHVHLRHGSSALEKQITEFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYRACRIGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVAKTKEKDDENGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS 1968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1441 1968 FunFam Endoribonuclease dicer-like protein 1406 1600 - -
Bisa10g1441 1968 SUPERFAMILY PAZ domain 1262 1384 IPR036085 GO:0005515
Bisa10g1441 1968 CDD SF2_C_dicer 706 836 - -
Bisa10g1441 1968 SMART riboneu5 1423 1608 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 SMART riboneu5 1644 1800 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 FunFam Endoribonuclease dicer-like 1 1624 1798 - -
Bisa10g1441 1968 SMART PAZ_2_a_3 1244 1408 IPR003100 GO:0005515
Bisa10g1441 1968 SUPERFAMILY RNase III domain-like 1628 1798 IPR036389 GO:0004525|GO:0006396
Bisa10g1441 1968 CDD RIBOc 1645 1800 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 1867 1885 - -
Bisa10g1441 1968 Pfam Ribonuclease III domain 1441 1588 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 Pfam Ribonuclease III domain 1664 1777 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 FunFam Endoribonuclease dicer-like 1 700 862 - -
Bisa10g1441 1968 ProSitePatterns Ribonuclease III family signature. 1664 1672 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 ProSiteProfiles Ribonuclease III family domain profile. 1629 1777 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 ProSiteProfiles Ribonuclease III family domain profile. 1427 1588 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 FunFam endoribonuclease Dicer homolog 1 1896 1965 - -
Bisa10g1441 1968 ProSiteProfiles PAZ domain profile. 1244 1384 IPR003100 GO:0005515
Bisa10g1441 1968 SUPERFAMILY RNase III domain-like 1400 1607 IPR036389 GO:0004525|GO:0006396
Bisa10g1441 1968 SMART helicmild6 742 828 IPR001650 -
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 1867 1888 - -
Bisa10g1441 1968 Gene3D Dicer dimerisation domain 896 998 IPR038248 -
Bisa10g1441 1968 Gene3D - 1801 1880 - -
Bisa10g1441 1968 SMART DRBM_3 1804 1865 IPR014720 -
Bisa10g1441 1968 SMART DRBM_3 1891 1964 IPR014720 -
Bisa10g1441 1968 Gene3D paz domain 1260 1382 - -
Bisa10g1441 1968 FunFam Endoribonuclease Dicer 1 1264 1382 - -
Bisa10g1441 1968 Gene3D Ribonuclease III domain 1406 1602 IPR036389 GO:0004525|GO:0006396
Bisa10g1441 1968 Gene3D Ribonuclease III domain 1624 1798 IPR036389 GO:0004525|GO:0006396
Bisa10g1441 1968 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1890 1965 IPR014720 -
Bisa10g1441 1968 Pfam Type III restriction enzyme, res subunit 305 472 IPR006935 GO:0003677|GO:0005524|GO:0016787
Bisa10g1441 1968 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1803 1866 IPR014720 -
Bisa10g1441 1968 Gene3D - 699 865 IPR027417 -
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 133 170 - -
Bisa10g1441 1968 CDD DSRM_DCL_plant 1896 1957 - -
Bisa10g1441 1968 Gene3D - 300 544 IPR027417 -
Bisa10g1441 1968 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 713 873 IPR001650 -
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 276 304 - -
Bisa10g1441 1968 Pfam Helicase conserved C-terminal domain 709 826 IPR001650 -
Bisa10g1441 1968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 843 IPR027417 -
Bisa10g1441 1968 Gene3D - 1896 1966 - -
Bisa10g1441 1968 FunFam Endoribonuclease dicer-like 1 896 997 - -
Bisa10g1441 1968 CDD DEXHc_dicer 305 504 - -
Bisa10g1441 1968 FunFam Endoribonuclease dicer-like protein 301 541 - -
Bisa10g1441 1968 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 313 490 IPR014001 -
Bisa10g1441 1968 Pfam PAZ domain 1258 1404 IPR003100 GO:0005515
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 987 1013 - -
Bisa10g1441 1968 PANTHER DICER-RELATED 1256 1868 - -
Bisa10g1441 1968 SUPERFAMILY dsRNA-binding domain-like 1759 1873 - -
Bisa10g1441 1968 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 901 996 IPR005034 GO:0016891
Bisa10g1441 1968 CDD PAZ_CAF_like 1237 1386 - -
Bisa10g1441 1968 Pfam Dicer dimerisation domain 901 989 - -
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 989 1013 - -
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 150 170 - -
Bisa10g1441 1968 SUPERFAMILY dsRNA-binding domain-like 1894 1964 - -
Bisa10g1441 1968 SMART ultradead3 302 505 IPR014001 -
Bisa10g1441 1968 CDD RIBOc 1423 1606 IPR000999 GO:0004525|GO:0006396
Bisa10g1441 1968 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 1890 1963 - -
Bisa10g1441 1968 MobiDBLite consensus disorder prediction 212 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1441 Bisa-ChrBisa10 39455957 39467501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1441 725 868 Eukaryotic Initiation Factors Gene Family AT5G11200 28.571 1.76e-06 50.8