Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1440 ATGTTACCTCTCGTTCTGCTTCCTGGGTTCCTACTTGTGTGCTTGCCTTTTGCTTCATGTGAATCGAAGCTACTAGAATCACCCACTTTGCTTTCCAATTCCTGCAACGAAACGTGTGGGAAACTCCGCATTCCTTTTCCGTTCTACATAAACTCTTCTTGTGCGTCAATTTCAAGCTCTTTCCATCTCTCTTGCTCGAATTCCTCTTCCCTTTTGCTGAAGATTAACTCAGAGCGCTACCCGGTGATTGAATTCTTCTCCGATGGTGTCCTTGTGGATTTCCCCGGGACGTCTTCGTGTCGTCAATACAATGACCTCAACTCGTTTGGTAAAATTCTTGTGAGAAACGAGCACTTCGGGGTTTCAGCAGATAATGTGGTTGGCCTCTATGACTGTGAGGATTCGTCTCTGTGTAGAGCAGATTGTGAAACAGTAGATTTACCCGGTTGTGATGGAGATAGAGGCTCACTTGGGTGTTGCTATCCACTCTCTGATCATAGCATATGGCATATTGGAGAAGGGTTTTCTGTGTTCTCTCAATATGGATGCAGGGGATTCTCTAGCTGGGCTGTTCTGAGAGGGTCAAATTCAGGAAAGCGTGGAGTCAAACTGGAATGGGCTGTTCCCAAGAACAAGTCCATGGAAGTTTGCTCAAGTAATGCAGATATGGTGAATGCTACAGCAGTTGAAGGAGGAGGAAGGTGCGTGTGTCAGGATGGGTATGTTGGTGATGGATTTGCTAATGGAACTGGATGCTTGCAGTCCTGTATAAAAGATGGACGGGAAGCATATGGCAGTGACTGCTACATCAAAAGAGAAGATGAAAGAAAATTTGTCATCATCGCCGGAATCCTTGGTCCTGTTCTTATTGTTGCCTCCTTGGTAGCGCTATTTTTTCTTCTTAAAAGACCTGTAAAACCGGGGATGTTTGACACTGAGCAGGCTTACTATCACAACACCTCCTTCCGGAAGGCTTGTAGGACTCGATTATTCAGCCACCGCGAGCTAGAGGAGGCCACCAAAGGTTTCGAAGAGGGCCAAAAACTCATGCATAGCAGCAACAATGGCGCAATTTTTGCTGGAGTTTTAGGGGATGGATCTCACATAGCTGTCCACAAGTTACAATATGAAAATGAGAAGGACCTTGTTCAAGTCCTGTCACAAATTGAGGTTCTCTCTGCCATTGTACATAGGAATATGGCCCGTCTTCTTGGATGCTGTATAGATTCCGGCTACCCTTCCCTTGTTGTCTATGAGTACCCGGCCAACGGTACGTTGGAGGAACATTTACTTCAAACAAAGGGACCAAAAGTTTGCTTAGACTGGTATAAAAGATTGACTATTGCTGCAGAAACTGCCAGTGGTCTTGCATTCTTACAATATGAAATCTCTCCCCCCATTTTCCACCACAACCTCATACCCGGCTGCATCTTCCTAGATGACGATTTTTCAGTTAAACTCGCGGGGTTTGGGCTAATCAATTCCAAATTTAATTATGGTCATGAAAACAACAACATCATATGCAAAAACGATGTTTATGACATGGGTGTGGTGCTTCTCAAGATCATTTCAGGCTCAAATCATCTGGACTCTCCAACTATAGCACTTCAAAAGATAAGGGCAGGGAAGCTCGAGGAAATCGTCGATCCCCTCTTGTACTACCACGAGCAGCCTCATTCGCGCCAAGAGCAGATCCAGATCATAGCTGACCTTGCCACGAGATGTTTGTTGTTTGGTGCAGATGGGAAGATGGGGATGATTGATGTTGCAAGGGAATTGATACACATAACAAAAGAGTGTGTTGGTGTTGATGGAGGGATTGTGAGAGTGCCTGCTTTGGAGGAGACATTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGCATATGTCAGAAAAAACTGCTGAAATTACCGATAATCGTCCTCGTTTGAATCAAAGAATTCTTTCATCTCTATCAAGGAGATCAGTCGCTGCTCACCCTTGGCATGATCTTGAAATTGGTACCATTATTTGACCTGATGCTCCCCATATTTTCAATTGTGTTGTGGAGATCACAAAGGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACAGGAATGATCAAGGTGGATCGCATATTGTACTCATCGGTTGTGTATCCTCATAACTATGGCTTCATCCCTCGAACCCTGTGTGAAGACAACGATCCCCTTGATGTGTTGATCCTCATGCAGGTAGACAAGAAGAATGAGCATAAAGAGGTGGCCGTTAATGAGTTTTTGCCTCCAGCTACTGCCAACGAAGCCATCCAACACTCAATGGATCTTTATGCTGAGTATATTCTGCACACCTTGAGGCAATAG 2361 0.4452 MLPLVLLPGFLLVCLPFASCESKLLESPTLLSNSCNETCGKLRIPFPFYINSSCASISSSFHLSCSNSSSLLLKINSERYPVIEFFSDGVLVDFPGTSSCRQYNDLNSFGKILVRNEHFGVSADNVVGLYDCEDSSLCRADCETVDLPGCDGDRGSLGCCYPLSDHSIWHIGEGFSVFSQYGCRGFSSWAVLRGSNSGKRGVKLEWAVPKNKSMEVCSSNADMVNATAVEGGGRCVCQDGYVGDGFANGTGCLQSCIKDGREAYGSDCYIKREDERKFVIIAGILGPVLIVASLVALFFLLKRPVKPGMFDTEQAYYHNTSFRKACRTRLFSHRELEEATKGFEEGQKLMHSSNNGAIFAGVLGDGSHIAVHKLQYENEKDLVQVLSQIEVLSAIVHRNMARLLGCCIDSGYPSLVVYEYPANGTLEEHLLQTKGPKVCLDWYKRLTIAAETASGLAFLQYEISPPIFHHNLIPGCIFLDDDFSVKLAGFGLINSKFNYGHENNNIICKNDVYDMGVVLLKIISGSNHLDSPTIALQKIRAGKLEEIVDPLLYYHEQPHSRQEQIQIIADLATRCLLFGADGKMGMIDVARELIHITKECVGVDGGIVRVPALEETFSNSSLLQMISMSPDSMHMSEKTAEITDNRPRLNQRILSSLSRRSVAAHPWHDLEIGTIIXPDAPHIFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLILMQVDKKNEHKEVAVNEFLPPATANEAIQHSMDLYAEYILHTLRQ 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1440 786 ProSitePatterns Inorganic pyrophosphatase signature. 733 739 - -
Bisa10g1440 786 Gene3D Inorganic pyrophosphatase 661 746 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bisa10g1440 786 SUPERFAMILY Protein kinase-like (PK-like) 326 593 IPR011009 -
Bisa10g1440 786 FunFam Putative WAK-related receptor-like protein kinase family protein 422 606 - -
Bisa10g1440 786 FunFam probably inactive receptor-like protein kinase At2g46850 315 420 - -
Bisa10g1440 786 Pfam Inorganic pyrophosphatase 686 749 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bisa10g1440 786 Pfam Protein tyrosine and serine/threonine kinase 353 496 IPR001245 GO:0004672|GO:0006468
Bisa10g1440 786 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 596 IPR045274 GO:0007166
Bisa10g1440 786 ProSiteProfiles Protein kinase domain profile. 344 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1440 786 Gene3D Phosphorylase Kinase; domain 1 316 420 - -
Bisa10g1440 786 Pfam Wall-associated receptor kinase galacturonan-binding 35 84 IPR025287 GO:0030247
Bisa10g1440 786 SUPERFAMILY Inorganic pyrophosphatase 659 782 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bisa10g1440 786 Gene3D Transferase(Phosphotransferase) domain 1 422 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1440 Bisa-ChrBisa10 39445928 39453893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1440 35 596 Receptor kinase-like Gene Family AT2G23450 28.922 6.41e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Bisa10g1440 PK_Tyr_Ser-Thr 1.8e-14 CL0016