Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1392 ATGGAATACTTGACTGAAGATAGCTTTAGTATTACGATTAATATTTTTGAACACAGGCTTTCACCTTTTACCAGGAATCCCATATTAACTTTGATTTCACAGCTTCCAATTCCTTCCGTTATTCCTTGTGAAGAATTACTCCACGACACTCTTGGGTTTCTCCGAGCAAACTTATCCAACTTTCTTTCTGACGATGAACTTCAAAGACTGGAACCTGGATTTATGTCTGATATTCAATCAAGAGTCCAAAATTATCGTGCTGCCGTGCAAGAAATAAGTCAAACTACTACTAGTCCTCTCTTGATACCATTGTCAATAGATGTTCAACTTCCTCATTCGTATGAAGAAGATTATGAAGAAGATCTAGACACAATTCCAGAATGGGAGGAAGAAGATTACGAAGAAGATCAAGACATGATTGATTTGGTCATAGAGCAATCAATGGAAGAAGTGGTTACGATTCCAGCGTCGGAGAAAGCCATAGCATCACTCAAGAAACTTGAATTGCCAAATGACAAAGCTAAGATGGACCAGTGCAGCATTTGTCTAGAAAATTTTGAAGAAGATAACGATGTTTCCGGAACACCTTGTAACCACATCTATCACAACAATTGCATCGTGAAGTGGCTCAAAACTAGTCAATCATGTCCATTATGTCGGTTCCAAATGTGCCCATAG 678 0.385 MEYLTEDSFSITINIFEHRLSPFTRNPILTLISQLPIPSVIPCEELLHDTLGFLRANLSNFLSDDELQRLEPGFMSDIQSRVQNYRAAVQEISQTTTSPLLIPLSIDVQLPHSYEEDYEEDLDTIPEWEEEDYEEDQDMIDLVIEQSMEEVVTIPASEKAIASLKKLELPNDKAKMDQCSICLENFEEDNDVSGTPCNHIYHNNCIVKWLKTSQSCPLCRFQMCP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1392 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 224 IPR013083 -
Bisa10g1392 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 86 223 - -
Bisa10g1392 225 SUPERFAMILY RING/U-box 178 223 - -
Bisa10g1392 225 CDD RING-H2_PA-TM-RING 178 220 - -
Bisa10g1392 225 SMART ringv_2 178 220 IPR011016 GO:0008270
Bisa10g1392 225 ProSiteProfiles Zinc finger RING-type profile. 179 220 IPR001841 -
Bisa10g1392 225 Pfam Ring finger domain 177 220 IPR001841 -
Bisa10g1392 225 SMART ring_2 179 219 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1392 Bisa-ChrBisa10 36409768 36410445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1392 138 223 C3H Transcription Factor Family AT1G18760 32.584 8.69e-14 66.2