Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1387 ATGAAGGAGATGAGGATTGTCACAAACAAGCTCGTGAAATCCGGTTTCTCAGGGGGGGCGCCGAGGGTCATTCGGATCACCGTCACTGACCACTACGCCACTGACACTTCAAGCGACGACGACGGAGGCGCCAGGAACGGAAGGTTGAGGAGGCTCGTCAACGAGATTAGGTTCGAGAGGTGCTCGAATTTCACGGCTAACAGAGAGGCTCACGCGGGTCCGAGCGCTACTTCTTCTGCGAGACAGAGGCCCAAGCAATGCAGGGCAAGACCCGGAAAGTCCGATCGGGTCGACCCGAACGCGAAGAAGTACCGGGGCGTCCGTCAGCGGGAGTGGGGGCGGTGGGCGGCGGAGATCAGAGATCCGGTGCGGCGGGAGAGGGTGTGGCTGGGGACCTTCGACACGGCGGAGGAGGCCGCTCTGGTGTACGACAAGGCGGCGATTCGGCTCCGTGGCTCCGACGCCATGACGAACATCCTCAAACCGCCGCCTAAGACTCCTCTTCCCGTCGACCAATCCGAGGTTTTCGCCAAGCTCGATGCAGTTAAAGAGTCTCACGACAATCGCGTGTCGTCTCCGACCTCCGTCCTGAGGTTTCATTCTGAAGAAGAACCCAAAATAGAGCCCAGAGAAGAAGAAGAACCATATCTTCAAAACGACAACACCACGACCCTGTCGTTTTTAGGTTCCCCGTTCGTCAATCGCTACTTCGATTCCGATATCCCCCTTCCGATGTTCTTCGACGAACCCCAGTTCGTCTCAAACGACAATTTCAGTTTCAGAGACATCCCGTTTCATATTGACCAAGATTTTGAGTCCTTTAAATGGGACATGGACAGTTACTTCCAAGAAGTTTGA 858 0.5571 MKEMRIVTNKLVKSGFSGGAPRVIRITVTDHYATDTSSDDDGGARNGRLRRLVNEIRFERCSNFTANREAHAGPSATSSARQRPKQCRARPGKSDRVDPNAKKYRGVRQREWGRWAAEIRDPVRRERVWLGTFDTAEEAALVYDKAAIRLRGSDAMTNILKPPPKTPLPVDQSEVFAKLDAVKESHDNRVSSPTSVLRFHSEEEPKIEPREEEEPYLQNDNTTTLSFLGSPFVNRYFDSDIPLPMFFDEPQFVSNDNFSFRDIPFHIDQDFESFKWDMDSYFQEV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1387 285 MobiDBLite consensus disorder prediction 192 217 - -
Bisa10g1387 285 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 210 - -
Bisa10g1387 285 CDD AP2 102 158 IPR001471 GO:0003700|GO:0006355
Bisa10g1387 285 SUPERFAMILY DNA-binding domain 103 159 IPR016177 GO:0003677
Bisa10g1387 285 SMART rav1_2 103 166 IPR001471 GO:0003700|GO:0006355
Bisa10g1387 285 Gene3D AP2/ERF domain 102 160 IPR036955 GO:0003700|GO:0006355
Bisa10g1387 285 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Bisa10g1387 285 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Bisa10g1387 285 MobiDBLite consensus disorder prediction 88 105 - -
Bisa10g1387 285 MobiDBLite consensus disorder prediction 199 217 - -
Bisa10g1387 285 ProSiteProfiles AP2/ERF domain profile. 103 160 IPR001471 GO:0003700|GO:0006355
Bisa10g1387 285 MobiDBLite consensus disorder prediction 68 84 - -
Bisa10g1387 285 FunFam Ethylene-responsive transcription factor 2 102 161 - -
Bisa10g1387 285 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Bisa10g1387 285 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1387 Bisa-ChrBisa10 36184767 36185624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1387 2 284 AP2-EREBP Transcription Factor Family AT2G46310 37.582 5.84e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g1387 AP2 4.7e-14 CL0081