Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1356 ATGATCACACCCTTGTTCTCAGCAATTCAGCAACTTCACATCTTTCTGAATGCTCACTGCTTTATAACCCCAACACAGACAACAAATCTCACTCTCTGCCTCATAAGCTCAATTCACGACACTGAAACTGAATCGAACTTGCTAAGAATGGAGGACGACCAACTTAGTCTCGTTGAAGAGCTAAACCAAGGGAAGGAGCTCGCAAGGCAGCTCTGTAACCATGTTCTCTCCTCTTCTTCTCGTGAAAGGAATGAGTTCTTGATTGAGAAAATACTCCGTTCCTATGAAAAAGCTCTCAAAATGCTGAATTGGGAAGAAAATGTTAATAAAGCTGTTGCTAATGGGAGACCCAGAAGTGAGGTCTTGGACCAGGAAAACAAACACAGAGATGTCTACAAGAAAAGAAAGATCATGCCCAGATGGACAGAGCAGGTGAAGGTGTGCTCAGGAACAGGGCTCGAGGGTTCATTGGATGATGGCTATAGCTGGAGAAAATATGGCCAGAAGGATATTCTTGGAGCTAAATTTCCAAGGGGATACTACAGATGCACTCATAAAAATGGACAAGGTTGTCTTGCCACAAAACAAGTTCAAAGGTCAGATGAAGACCCAACAATATACGAAGTGATCTACAGAGGAAGACATACCTGCAACAACCAAGCTTCATATCTGAAAAAGGTCTCAGCATCAAAGACAAAAATGGGTTTGGAAGAAAACCAGTACCATCATCATTATCAATGTCATAAACAAGAAGAAGAACAAGAAGAAGACGAAGAAGAAGAAATGGGACAATCTTTAGAGACAATCTTCAATTTTGGAACAGAACCTGAAGCCAAAATGGAGGACATTTTCCCATCATTTGGCTTTCCTTCTACCTCAGAAAACAGTTCCATGAAGAATTTTTCTGCTGATGATTTCATTTCCCCCGAAACCTCGGAGTCAAACCTTTTATGTATGTCACCATGTCACTTGGGGAGTGTTGGAATGTTACAAAATGTTCAAACTTCAGAATCAGATGTGACTGATACAGTTTCAGCCCCAACTTCAGTCACCAATTCGCCATTGGTGGATTTGGATCTCTTGTTTAAGAAGGAGGATTTTCAAACCGACCTTCCTTTCAATATTTTTGAATTTTTCTCTTCAGAGTTTTCCTAG 1155 0.4087 MITPLFSAIQQLHIFLNAHCFITPTQTTNLTLCLISSIHDTETESNLLRMEDDQLSLVEELNQGKELARQLCNHVLSSSSRERNEFLIEKILRSYEKALKMLNWEENVNKAVANGRPRSEVLDQENKHRDVYKKRKIMPRWTEQVKVCSGTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHKNGQGCLATKQVQRSDEDPTIYEVIYRGRHTCNNQASYLKKVSASKTKMGLEENQYHHHYQCHKQEEEQEEDEEEEMGQSLETIFNFGTEPEAKMEDIFPSFGFPSTSENSSMKNFSADDFISPETSESNLLCMSPCHLGSVGMLQNVQTSESDVTDTVSAPTSVTNSPLVDLDLLFKKEDFQTDLPFNIFEFFSSEFS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1356 384 Pfam WRKY DNA -binding domain 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g1356 384 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 53 328 IPR044810 GO:0003700
Bisa10g1356 384 SUPERFAMILY WRKY DNA-binding domain 156 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g1356 384 ProSiteProfiles WRKY domain profile. 152 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g1356 384 FunFam WRKY transcription factor 53 143 220 - -
Bisa10g1356 384 Gene3D WRKY domain 143 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g1356 384 SMART WRKY_cls 157 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1356 Bisa-ChrBisa10 34670070 34672495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1356 63 244 WRKY Transcription Factor Family AT5G24110 45.902 1.33e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa10g1356 WRKY 3.4e-27 CL0274