Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1355 ATGGACAAACGCCGCAGAAAGCAAGAGAAAACCAGTCGCTCTTTCTCTGAAGAGGTGAGCAGCATTGAGTGGGAGTTCATTAACATGTCAGAGCAAGAAGAAGATCTCATTTACAGAATGTACAAACTAGTTGGAGACAGATGGGGTTTGATAGCAGGAAGAATTCCAGGTCGAAAAGCTGAAGAGATAGAGAGGTTTTGGATGATGAGACATGGAGAAGTGTTTGCCAGCAGACGAGAAAAACTTAACAACAGATCATGTAAATCCTGA 270 0.4259 MDKRRRKQEKTSRSFSEEVSSIEWEFINMSEQEEDLIYRMYKLVGDRWGLIAGRIPGRKAEEIERFWMMRHGEVFASRREKLNNRSCKS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1355 89 SUPERFAMILY Homeodomain-like 30 68 IPR009057 -
Bisa10g1355 89 CDD SANT 28 69 IPR001005 -
Bisa10g1355 89 Gene3D - 30 70 - -
Bisa10g1355 89 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 70 - -
Bisa10g1355 89 SMART sant 25 73 IPR001005 -
Bisa10g1355 89 FunFam MYB-like transcription factor 28 70 - -
Bisa10g1355 89 Pfam Myb-like DNA-binding domain 29 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1355 Bisa-ChrBisa10 34416920 34419523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1355 29 80 MYB Transcription Factor Family AT5G52600 51.923 1.20e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa10g1355 Myb_DNA-binding 1.9e-06 CL0123