Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1354 ATGCTTAATATATGTAGGGTCCACTTCTATAAACTAGCCTCATCATCAGTTTGTTTCACAAATCTCATTCTCAAACTCCAACTTCAGGCCATAATAACTTCGAAATCAGGGGCTAAGCATATAATTGAGACTTGGGATGCAGACCTTGGTTTACAGAAGGTTGCACTTGAGAGTATGAGACAGGAAATTCATACTTTAACAAGCTCCATGACCTCAGTTCCAAAGCTGCTAAAATTTCCTCATCCCTACTATAGAACTCTTAAACCATACTATGAGACTACAACAGAGTCTGATTTGAAGCCGGAGTGGATGGCTCCAGAATTTATCCATGGAGAACCTTCAAATGAGAAGTCTGATGTTTATAGCTTTGGAGTCATCCTGTGGGAATGTGATGATGCAACAATCATGGAATGGAATCAGCCCTACCCAGGTAAATTTGATGACTGTCTGAGGCCTAAAATCCAAGTAGTTGAAGTCTTCTAA 483 0.3996 MLNICRVHFYKLASSSVCFTNLILKLQLQAIITSKSGAKHIIETWDADLGLQKVALESMRQEIHTLTSSMTSVPKLLKFPHPYYRTLKPYYETTTESDLKPEWMAPEFIHGEPSNEKSDVYSFGVILWECDDATIMEWNQPYPGKFDDCLRPKIQVVEVF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1354 160 Pfam RPN1 N-terminal domain 45 100 IPR040892 -
Bisa10g1354 160 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1354 160 Gene3D Transferase(Phosphotransferase) domain 1 65 157 - -
Bisa10g1354 160 Pfam Protein tyrosine and serine/threonine kinase 88 130 IPR001245 GO:0004672|GO:0006468
Bisa10g1354 160 SUPERFAMILY Protein kinase-like (PK-like) 89 130 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1354 Bisa-ChrBisa10 34370747 34375651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1354 101 144 MAP Kinase Kinase Kinase AT4G24480 63.636 2.26e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa10g1354 PK_Tyr_Ser-Thr 1.2e-10 CL0016