Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1337 ATGAAGTTTCTCATTTCCGTTCATCACAGATTCACAATTCTACATCAGGTTTCTAGCAGAACAGTACAGAGTCCACTACACCAGCTTCATGTAACATTTCAACACTACTCTCTCTTCTGCTTCGGCTTTGCTGTCTGCCTCCGCTCTTGTTTGGTTCCCCAGAAAGCGCGGGAGAAAGAGAAGTTTTGGGGCCTTATTCGTTTCTCAGTGCAAAACTTGATTTTTCTCACTGGTTGTGGAAGTAGCTTAATCATGAATTCAAAGGGACATAAATTTGTGAGGTTTGAGGATTGGAGTTCAGAATCATCCTTCAGCCCTCAGCAGAAAAATCCAACTGATAATGGACGTCATGCCAGAAAACTGAGACCAAGTGTGAATGCTGTTTTAGACAGCATCAAAAGAAGAGTAGAAAGTGGGTCTCACAAGATCAAAAGCTTGAGAAAACCCTCAACTGTGCATCCCATAAGTGATGGACCACTAGAAAAGTTGCCTTCTAGAAGCAAGATTCTTGATCCACAGGGACAAGTGCTTCAGAAATGGAACAAGATATTTGTATTCGCTTGTGTGATGGCGGTCTCTGTGGATCCTCTCTTCTTTTACATCCCAACGATTGAAGACTCGAGGATGTGCCTTAAGTTGGACGGGGCTTTGCAGATTACTGCTTCTGTTCTTCGGACATTCTTCGATCTGTTTTATGTTCTTCACATAATCTTTCAGTTTCAAACTGGGTTTATTGCTCCTTCGTCGAGAGTGTTTGGTAGGGGTGAGCTGGTTGATGATCGTGTGGCTATAATGAAAAGATATGTGTGTTCGTATTTCTTCATTGACATTCTCGCAATTCTTCCACTTCCTCAGGTGGTTGTTTTATTCATCATTCCAAACCTAAAAGGTTCGGTACCAGTAGTGGCGAAGAACATATTGAAGTACATAGTGATTTTCCAGTATGTGCCCAGATTACTTCGGTTTTACCCATTATTCAAAGAAGTAACAAGAACATCTGGCATACTCACTGAGACTGCATGGGTTGGAGCTGCTTTCAATCTTCTTCTCTATATGCTAGCAAGTCATTTGGTGGGAGCTTTCTGGTACCTGTTGTCGATAGAAGCAGAGGTTCGATGCTGGCACAAAGCCTTCAACAATACTACAATTCATGGTGATCCAGACTTGCGTTGCGATCAATCCAATCAAACTATTGCTTCACTTCTTAAAAGTTCTTGTTATGTCGTCGATCCTGATAAGATTACAGAGACATCGTTCTTCAATTTCGGAATATACACCGATGCTCTGAAATCTGGTGTGCTAAAATCAACAACAGAATTTACTAAGAAGTTCTTCTTTTGCTTTTGGTGGGGTTTGCGAAGTGTGAGTTCTGTTGGACAAAGCCTCTCAACGAGCACCTATGTGTGGGAGATATTCTTTGCCATCTTCATTGCCATCTTTGGATTGGTTTTATTCTCATTACTTATTGGAAACATGCAGAAATATCTGCAATCAACGACAGTGAGAGTGGAAGAGATGAGAGTGAAGAGGAGAGACGCTGAGCGATGGATGTCGCATCGGATGCTACCAGAGAACTTGAGGGAGAGAATCAGACGCTATGAGCATTACAAATGGCAAGAAAATCGAGGTGTGGAAGAGGAATCCTTGATTCGCAATCTTCCCAAAGATCTCAGAAGGGACATCAAGCGCCATCTTTGCTTGGCTTTACTTAAAAAGGTGCCAATGTTTGAGAAAATGGACGAACAGCTACTGGATGCGATGTGTGACAGATTGAAACCAGTTCTGTACACAGAGAAGAGCTACATTGTTCGGGAAGGCGATCCAGTGGATGAAATGCTGTTCATCATGCGAGGCAAGCTGGCCACCATGACCACCAATGGCGGAAGAACTGGTTTCTTCAACTCGTCGGTTCTGAAGGCCGGGGATTTCTGTGGAGAAGAGCTTCTGACATGGGCTTTGGACCCCAATTCGTCCACTAATCTTCCCATTTCGACCAGAACGGTGGAGACCATATCGGAGGTCGAAGCTTTTGCTCTCATGGCGGATGACTTGAAGTCTGTGGCTTCACAGTTTCGACGCCTTTCAAGCAAACACCTCCAGCACACTTTCAAGTTCTCTTCCTTGCAATGGAGGACATGGGGTGCCTGCTTCATACAAGCAGCTTGGCGTCGCCACTGCAAGAAGAAGATGGAGAGGTCATTGCGTGAAGAGGAAGAAAAGCTCAAACATGCTTTGGCCAATGAGAATGGGTCGTCTTCAACACCCACTCTCGGAGCCACCATTTATGCTTCAAGATTTGCAGCCAATGCATTGCGAAATTTGCGACAGAACGCCCAGCGCGACAGAAGAAGCCAGAGATTGTTGCCTTTCATGCCTCAGAAGCCGGCAGAGCCTGATTTCACTTCTCAGAACCACTAG 2418 0.4442 MKFLISVHHRFTILHQVSSRTVQSPLHQLHVTFQHYSLFCFGFAVCLRSCLVPQKAREKEKFWGLIRFSVQNLIFLTGCGSSLIMNSKGHKFVRFEDWSSESSFSPQQKNPTDNGRHARKLRPSVNAVLDSIKRRVESGSHKIKSLRKPSTVHPISDGPLEKLPSRSKILDPQGQVLQKWNKIFVFACVMAVSVDPLFFYIPTIEDSRMCLKLDGALQITASVLRTFFDLFYVLHIIFQFQTGFIAPSSRVFGRGELVDDRVAIMKRYVCSYFFIDILAILPLPQVVVLFIIPNLKGSVPVVAKNILKYIVIFQYVPRLLRFYPLFKEVTRTSGILTETAWVGAAFNLLLYMLASHLVGAFWYLLSIEAEVRCWHKAFNNTTIHGDPDLRCDQSNQTIASLLKSSCYVVDPDKITETSFFNFGIYTDALKSGVLKSTTEFTKKFFFCFWWGLRSVSSVGQSLSTSTYVWEIFFAIFIAIFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAERWMSHRMLPENLRERIRRYEHYKWQENRGVEEESLIRNLPKDLRRDIKRHLCLALLKKVPMFEKMDEQLLDAMCDRLKPVLYTEKSYIVREGDPVDEMLFIMRGKLATMTTNGGRTGFFNSSVLKAGDFCGEELLTWALDPNSSTNLPISTRTVETISEVEAFALMADDLKSVASQFRRLSSKHLQHTFKFSSLQWRTWGACFIQAAWRRHCKKKMERSLREEEEKLKHALANENGSSSTPTLGATIYASRFAANALRNLRQNAQRDRRSQRLLPFMPQKPAEPDFTSQNH 805
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1337 805 CDD CAP_ED 575 705 IPR000595 -
Bisa10g1337 805 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 161 800 - -
Bisa10g1337 805 FunFam Cyclic nucleotide-gated ion channel 1 502 566 - -
Bisa10g1337 805 SUPERFAMILY Voltage-gated potassium channels 171 497 - -
Bisa10g1337 805 MobiDBLite consensus disorder prediction 101 120 - -
Bisa10g1337 805 Pfam Ion transport protein 180 503 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa10g1337 805 SUPERFAMILY cAMP-binding domain-like 504 698 IPR018490 -
Bisa10g1337 805 MobiDBLite consensus disorder prediction 777 805 - -
Bisa10g1337 805 FunFam Cyclic nucleotide-gated ion channel 1 573 691 - -
Bisa10g1337 805 SMART cnmp_10 575 706 IPR000595 -
Bisa10g1337 805 Coils Coil 727 747 - -
Bisa10g1337 805 Gene3D - 182 499 - -
Bisa10g1337 805 Gene3D Helix hairpin bin 502 566 - -
Bisa10g1337 805 ProSiteProfiles cAMP/cGMP binding motif profile. 575 659 IPR000595 -
Bisa10g1337 805 Gene3D Jelly Rolls 573 693 IPR014710 -
Bisa10g1337 805 Pfam Cyclic nucleotide-binding domain 595 690 IPR000595 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa10g1337 Bisa-ChrBisa10 33864360 33878659 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1337 85 804 Ion Channels AT5G53130 63.912 0.0 929