Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1336 ATGGAGGACGCCACCACCACCACCATCACCATCAATACGTACAATCTCTTCGTGAGGCTCTTGGACGGAAAAACCCTAACCCTAAAATTCCCATCTCCCACCCTTTACGCTAATTCCATAAAGGATAGCCTTTTCGAAGTTACTAGAATCCCCTCTCAACACCAGCGCCTCCTAACCGGCACCCGAGATCTCAACGGTGACGAATCTGTAATCTCTTGCTCACCGGAAGGCGGCGATGTGTTCCCCACCGTACACCTGCTGCTTCGGCTCGCCGGTGGCAAGGGAGGGTTTGGGTCACTTTTGCGTGGTGCGGCGACGAAGGCTGGGCAGAAGAAGACGAACAATTTCGATGCTTGCAGAGATATGAGTGGACGAAGGTTGAGGCACGTGAATGCGGAGAAGAGGCTGGAGGAGTGGAAGGCGGAGGAGGCGGAGAGGAAGCTGGAGAAGATGGCGGAGGAGTTTTTAAAGAAGCAAGCGAAGAAGGGTAAGAAGGGTGTGGGTGATGGCGAGGCGCACAAGTATGTGGCGAAATACAGGGAGGAATCTGAGCGCTGCGCGGCTGAGGTTGCCGAGTCAGTAAAGGACGCTTTAATGTTTATCAATGGAAAGAGAAAGGCCTCTGATGCTGGAAAAGACAGAGCAGATGCGAAGAAGTTGAAGATATGGATGGAGAAAAGGGCATTAAATGAAAGTGATAGTGATGATTCTGATGAAGGCGAAAGTGATGTTGAAGGGGAAAATGAGCAATCAGTTGTATTAAATAATGGGAATGAGTCAGACTCAAATAAGGCTGAAGGCAGTTCAGGTTCAGTAACGGGTGGGAAACAGGATGGAGAATCTTCTGTTGCAGGCTCATCTGAAAATTGCTCTGAGGAAGAGAAAGAGACTGTTCTTGAGGGCAAAATGGAATCTGTCGAGAACATTGAATCTCCTCAGGCTGCACCAGGCAAAGTGGTTGAATCGGTGATATGTGATAAGATGGAAAAGGGTACCATTATACCTTCTTCAGAGTCTGCAGTTTCGGGAGTTGTTGCTGAAGAAGCTGGAAAGCAGGACTCTAGTGGAGCTGTATCCGACAAAGTTGACTTAGGAGATCAAACCTCAAATATTAAATTTGACGGATCACTTGAACATAAAGCATCAGCTCATGAAGAAACCACCACAAGTGCCAGTATTCCAGAAAAGGAGGAGCCTCTGAATTTTGATGCGATTAATTCAGCTGCAGAGCTTGAGGCTCTTGGTATGGAAAGGTTGAAGACTGAACTGCAGGCACGTGGGTTGAAATGTGGAGGCACATTGCAGGAGCGTGCTGCCAGGCTTTTCCTTCTGAAATCGACTCCACTGGACAGACTTCCTAAGAAGCTGCTTGCCAAAAAATGA 1383 0.483 MEDATTTTITINTYNLFVRLLDGKTLTLKFPSPTLYANSIKDSLFEVTRIPSQHQRLLTGTRDLNGDESVISCSPEGGDVFPTVHLLLRLAGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAEEAERKLEKMAEEFLKKQAKKGKKGVGDGEAHKYVAKYREESERCAAEVAESVKDALMFINGKRKASDAGKDRADAKKLKIWMEKRALNESDSDDSDEGESDVEGENEQSVVLNNGNESDSNKAEGSSGSVTGGKQDGESSVAGSSENCSEEEKETVLEGKMESVENIESPQAAPGKVVESVICDKMEKGTIIPSSESAVSGVVAEEAGKQDSSGAVSDKVDLGDQTSNIKFDGSLEHKASAHEETTTSASIPEKEEPLNFDAINSAAELEALGMERLKTELQARGLKCGGTLQERAARLFLLKSTPLDRLPKKLLAKK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1336 460 MobiDBLite consensus disorder prediction 229 317 - -
Bisa10g1336 460 MobiDBLite consensus disorder prediction 361 375 - -
Bisa10g1336 460 MobiDBLite consensus disorder prediction 337 400 - -
Bisa10g1336 460 Gene3D - 8 113 - -
Bisa10g1336 460 Pfam Replication stress response SDE2 C-terminal 385 459 IPR025086 -
Bisa10g1336 460 SUPERFAMILY Ubiquitin-like 12 94 IPR029071 -
Bisa10g1336 460 Coils Coil 127 161 - -
Bisa10g1336 460 MobiDBLite consensus disorder prediction 248 288 - -
Bisa10g1336 460 Pfam Silencing defective 2 N-terminal ubiquitin domain 14 162 IPR024974 -
Bisa10g1336 460 MobiDBLite consensus disorder prediction 289 303 - -
Bisa10g1336 460 PANTHER SPLICING FACTOR SF3A-RELATED 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1336 Bisa-ChrBisa10 33857068 33860423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1336 393 459 C2H2 Transcription Factor Family AT5G06160 47.761 1.12e-10 61.6