Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1314 ATGTATCACTCAAACCCCTCTTCACATGCACATTATATAAATACCGACCTTACTCTCTCCTCTCCTCCCATCCCAAACTCCTTTCTTAAAGTTACGAATTCTTACTGCCCAACTCATAAAGTTCCTAAAATGGCATTCAACAAAGCACTGTTTTGTCTCTGTGCCTTTCTCACCTTTTCCCTGTGCATCCTGATTGCTCTTTATAGCCCGCCTCCTTCCTCCACTAGCTCCGTTACTGGTCCTCAAAATAACTTCAACTCGCTCAGTATTTTAAAGAGGATCATAGAGCTTACTGGAGCTGAAGACTTTGGGTCTATATTAAGTGCGGCGACGAGGCATCATCTTCTTCAAAGGAATCACAAGGAGGAATGTGACAGCAGAAAATGGGATTCTGATCTCATTTCGAAATACAATGTGAGTCTTGTTTTGACGGTTGGTTTAAAGGATTGTGCCAACTTTAGTACTCTGCAAAAGGCAGTGGATGCTGTTCCTGAATCTAGCCCACAAAGGACACTCATCATTGTAGATTCTGGCATATACAGGGAGAAGGTAGTGGTGGAGGCAAACAAAACAAACCTAATACTGCAAGGTCAAGGGTATCTAAACACAGTCATAGAATGGAATGATACTGCGAATTCTACCGGAGGGACTTTTACAAGTTATTCCGTTGCCATCTTTGCGTCGAAGTTCATTGCCTACAACATCAGCTTTAGGAACACGGCTCCAGCGCCGGCACCAGGTGAGGTCGGAGCACAGGCGGTGGCACTGAGAGTGAGTGGTGATGAAGCGGCATTCTATGGATGTGGATTCTGTGGTGCTCAGGACACCCTCCATGATGACAAAGAACTGGGTATGGTAAGCGGATCCATCACAGCCCATGGACGTGAATCGCAGGAGGAGAAAACAGGGTTTTCGTTTGTGAATTGCAGGATTGATGGAAGTGGGAAAGTGTGGCTTGGAAGAGATTGGAGACCTTATGCCACTGTTGTCTTCTCAAATACTTCTATGTCTGACGTGGTAGCTCCCGAAGGATGGGATTCTGCCCCCTCCAGTCAACGGACCGTCTTCTTCGGGGAATACCACTGTTCTGGAGGTGGAGCTAACTTTTCATCAAGGGTCTCATACGCGAAGCAACTTACGGACGATGAAGCAGCCCCATTCATGAATGTTTCATACATTGATGGAAACCAATGGCTTCACAATCATCCAACATATATGTTACCCGCTGATACTATTTAG 1239 0.4568 MYHSNPSSHAHYINTDLTLSSPPIPNSFLKVTNSYCPTHKVPKMAFNKALFCLCAFLTFSLCILIALYSPPPSSTSSVTGPQNNFNSLSILKRIIELTGAEDFGSILSAATRHHLLQRNHKEECDSRKWDSDLISKYNVSLVLTVGLKDCANFSTLQKAVDAVPESSPQRTLIIVDSGIYREKVVVEANKTNLILQGQGYLNTVIEWNDTANSTGGTFTSYSVAIFASKFIAYNISFRNTAPAPAPGEVGAQAVALRVSGDEAAFYGCGFCGAQDTLHDDKELGMVSGSITAHGRESQEEKTGFSFVNCRIDGSGKVWLGRDWRPYATVVFSNTSMSDVVAPEGWDSAPSSQRTVFFGEYHCSGGGANFSSRVSYAKQLTDDEAAPFMNVSYIDGNQWLHNHPTYMLPADTI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1314 412 Gene3D - 285 407 IPR012334 -
Bisa10g1314 412 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 133 281 - -
Bisa10g1314 412 SUPERFAMILY Pectin lyase-like 140 402 IPR011050 -
Bisa10g1314 412 Pfam Pectinesterase 144 278 IPR000070 GO:0030599|GO:0042545
Bisa10g1314 412 Pfam Pectinesterase 288 396 IPR000070 GO:0030599|GO:0042545
Bisa10g1314 412 Gene3D - 103 284 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1314 Bisa-ChrBisa10 33391073 33392921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1314 143 400 Carbohydrate Esterase AT1G05310 48.829 6.09e-96 291