Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1313 ATGGCATTCAACAAAGCACTGTTTTGTCTCTGTGCCTTTCTCACCTTTTCCCTGTGCATCCTGATTGCTCTTTATAGCACGCCTCCTTCCTCCACTAGCTCCGTTACTGGTCCTCAAAATAACTTCAACTCGCTCAGTATTTTAAAGAGGATCATAGAGCTTACTGGGGCTGAAGACTTTGGGTCTATATTAAGTGCGGCGACGAGGCATCATCTTCTTCAAAGGAATCACAAGGAGGAATGTGACAGCAGAAAATGGGATTCTGATCTCATTTCGAAATACAATGTGAGTCTTGTTTTGACGGTTGGTTTAAAGGATTGTGCCAACTTTAGTACTCTGCAAAAGGCAGTGGATGCTGTTCCTGAATCTAGCCCACAAAGGACACTCATCATTGTAGATTCTGGCATATACAGGGAGAAGGTAGTGGTGGAGGCAAACAAAACAAACCTAATACTGCAAGGTCAAGGGTATCTAAACACAGTCATAGAATGGAATGATACTGCGAATTCTACAGGAGGGACTTTTACAAGTTATTCCGTTGCCATCTTTGCGTCGAAGTTCATTGCCTACAACATCAGCTTTAGGAACACGGCTCCAGCGCCGGCACCAGGTGAGGTCGGAGCACAGGCGGTGGCACTGAGAGTGAGTGGTGATGAAGCGGCATTCTATGGATGTGGATTCTATGGTGCTCAGGACACCCTCCATGATGACAAAGAACTGGGTATGGTAAGCGGATCCATCACAGCCCATGGACGTGAATCGCAGGAGGAGAAAACAGGGTTTTCGTTTGTGAATTGCAGGATTGATGGAAGTGGGAAAGTGTGGCTTGGAAGAGATTGGAGACCTTATGCCACTGTTGTCTTCTCAAATACTTCTATGTCTGACGTGGTAGCTCCCGAAGGATGGGATTCTGCCCCCTCCAGTCAACGGACCGTCTTCTTCGGGGAATACCACTGTTCTGGAGGTGGAGCTAACTTTTCATCAAGGGTCTCATACGCGAAGCAACTTACGGACGATGAAGCAGCCCCATTCATGAATGTTTCATACATTGATGGAAACCAATGGCTTCACAATCATCCAACATATATGTTACCCGCTGATACTATTTAG 1110 0.4622 MAFNKALFCLCAFLTFSLCILIALYSTPPSSTSSVTGPQNNFNSLSILKRIIELTGAEDFGSILSAATRHHLLQRNHKEECDSRKWDSDLISKYNVSLVLTVGLKDCANFSTLQKAVDAVPESSPQRTLIIVDSGIYREKVVVEANKTNLILQGQGYLNTVIEWNDTANSTGGTFTSYSVAIFASKFIAYNISFRNTAPAPAPGEVGAQAVALRVSGDEAAFYGCGFYGAQDTLHDDKELGMVSGSITAHGRESQEEKTGFSFVNCRIDGSGKVWLGRDWRPYATVVFSNTSMSDVVAPEGWDSAPSSQRTVFFGEYHCSGGGANFSSRVSYAKQLTDDEAAPFMNVSYIDGNQWLHNHPTYMLPADTI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1313 369 Gene3D - 60 241 IPR012334 -
Bisa10g1313 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 91 238 - -
Bisa10g1313 369 Gene3D - 242 364 IPR012334 -
Bisa10g1313 369 Pfam Pectinesterase 245 353 IPR000070 GO:0030599|GO:0042545
Bisa10g1313 369 Pfam Pectinesterase 101 235 IPR000070 GO:0030599|GO:0042545
Bisa10g1313 369 SUPERFAMILY Pectin lyase-like 97 359 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1313 Bisa-ChrBisa10 33382952 33384671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1313 100 357 Carbohydrate Esterase AT1G05310 48.829 2.33e-97 293