Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1311 ATGCCTCCTATGAAGATCCAACCCATTGCAGTTAAAGCTCAGACCAACAAAGATGGAGAAGGAACAGAGTTCGACACGCCTCCTTCCTCCACTAGCTCCGTTACTGGTCCTAAAAATAACTTCAACTCGCTCAGTATTTTAAAGAGGATCATAGAGCTTACTGGAGCTGAAGACTTTGGGTCTATATTAAGTGCGGCGACGAGGCATCATCTTCTTCAAAGGAATCACAAGGAGGAATGTGACAGCAGAAAATGGGATTCTGATCTCATTTCGAAATACAATGTGAGTCTTGTTTTGACGGTTGGTTTAAAGGATTGTGCCAACTTTAGTACTCTGCAAAAGGCAGTGGATGCTGTTCCTGAATCTAGCCCACAAAGGACACTCATCATTGTAGATTCTGGCATATACAGGGAGAAGGTAGTGGTGGAGGCAAACAAAACAAACCTAATACTGCAAGGTCAAGGGTATCTAAACACAGTCATAGAATGGAATGATACTGCGAATTCTACAGGAGGGACTTTTACAAGTTATTCCGTTGCCATCTTCGCGTCGAAGTTCATTGCCTACAACATCAGCTCTAGGAACACGGCTCCAGCGCCGGCACCGGGCGAGGTCGGAGCACAGGCGGTGGCACTGAGAGTGAGTGGTGATGAAGCAGCATTCTATGGATGTGGATTCTATGGTGCTCAGGACACCCTCCATGATGACAATGGCAGACATTATTTCAAAGAATGCTTCATCCAAGGCTCCATTGATTTCATTTTTGGAAACGCCAGATCGCTTTATGAGAATTGCAGCATGAAGTCCATAGCAGAAGAACTGGGTATGGTAAGCGGATCCATCACAGCCCATGGACGTGAATCGCAGGAGGAGAAAACAGGGTTTTCGTTTGTGAATTGCAGGATTGATGGAAGTGGGAAAGTGTGGCTTGGAAGAGATTGGAGACCTTATGCCACTGTTGTCTTCTCAAATACTTCTATGTCTGACGTGGTAGCTCCCGAAGGATGGGATTCTGCCCCCTCCAGTCAACGGACCGTCTTCTTCGGGGAATACCACTGTTCTGGAGGTGGAGCTAACTTTTCATCAAGGGTCTCATACGCGAAGCAACTTACGGACGATGAAGCAGCCCCATTCATGAATGTTTCATACATTGATGGAAACCAATGGCTTCACAATCATCCAACATATATGTTACCCGCTGATACTATTAAGTTACTAGTAGTAGCCCAATAA 1233 0.4566 MPPMKIQPIAVKAQTNKDGEGTEFDTPPSSTSSVTGPKNNFNSLSILKRIIELTGAEDFGSILSAATRHHLLQRNHKEECDSRKWDSDLISKYNVSLVLTVGLKDCANFSTLQKAVDAVPESSPQRTLIIVDSGIYREKVVVEANKTNLILQGQGYLNTVIEWNDTANSTGGTFTSYSVAIFASKFIAYNISSRNTAPAPAPGEVGAQAVALRVSGDEAAFYGCGFYGAQDTLHDDNGRHYFKECFIQGSIDFIFGNARSLYENCSMKSIAEELGMVSGSITAHGRESQEEKTGFSFVNCRIDGSGKVWLGRDWRPYATVVFSNTSMSDVVAPEGWDSAPSSQRTVFFGEYHCSGGGANFSSRVSYAKQLTDDEAAPFMNVSYIDGNQWLHNHPTYMLPADTIKLLVVAQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1311 410 MobiDBLite consensus disorder prediction 13 38 - -
Bisa10g1311 410 FunFam Pectinesterase 93 395 - -
Bisa10g1311 410 SUPERFAMILY Pectin lyase-like 96 393 IPR011050 -
Bisa10g1311 410 MobiDBLite consensus disorder prediction 20 38 - -
Bisa10g1311 410 Pfam Pectinesterase 100 387 IPR000070 GO:0030599|GO:0042545
Bisa10g1311 410 ProSitePatterns Pectinesterase signature 2. 247 256 IPR033131 -
Bisa10g1311 410 Gene3D - 93 397 IPR012334 -
Bisa10g1311 410 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 91 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1311 Bisa-ChrBisa10 33339284 33343637 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1311 99 391 Carbohydrate Esterase AT1G05310 56.856 3.86e-125 365