Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1310 ATGGGTCAATTGAATGCCTTCATTATAAATGGCAGTGACAATTGCAATACATCTATTGTTGGATTCTACCGTAGCTGTTCCAACCCCAGTTGCTCTTACGATTTATGTCTTACCTGCTGTCAAGAGCTCAGAAATTGCTGCCAACCTGGAGGCATAGAAGCTGAAACATCTTATAAACAATTTGTAGAGAAAGATTGGAACCAAGATTCAACAAGGATTCATAGTAAAACACATGGGGAAAGATATGGCTGGGAAAGCCAATTTGCACCTACTGTTTCTTGTTTTCCAACTGATGGAACCTCTCTGTTTCCTGAATGGAGAGCTAATAATGATGGTAACATTCCATGTCCTCCAAAACAGCGTGGAGGTTGTGGCGCTGCTTTGCTAGAATTGAGACGCATTTTTAAAGCTGATTGGGTAATGAAGCTGTTAAAGAATGCAGAGGATCTCACTAGAGACTATACGCCGCCACTGGATGTCGATCTGTCTGCTAAGTGCTCTTTGTGCCAGCCAAATTTGGTTGAAGGGAAAATTAATTATGAGGTCAGGCAGGCAGCACATAGGGATGACGGTCAAGATAATTTTTTATACAGCCCAAATGCCCTTGACATGTCTGATGATGAAATTGAGCATTTCCAGAGGCACTGGATGAGGGGAGAACCTGTGATTGTGAGAAAGGTTTTGGACAAGACATCCGGCCTTAGTTGGGAACCAATGGTTATGTGGAGGGCTTTCAGAGAAACAGGTTCTAGGGTGAAGTTTAAAGAGGAAACACGAAGTGTAAAGGCCATTGATTGCCTTGATTGGTGCGAGGTAGAGATTAATATTCACCAATTTTTCAAAGGCTACCTAGAGGGTCGAATGCATAAAACTAAGTGGCCAGAAATGTTGAAATTGAAAGACTGGCCTTCATCAACCTTATTTGAAGAGCGTTTGCCCAGGCATTGTGCTGAGTTTTTTACGGCACTCCCCTACAGGGACTACACTGATCCGAAATCTGGTCTTTTGAATTTTGCCAGCAAACTTCCTGATGGCTCACTTAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTTTCTGACGAGCTTGGTAGAGGTGATTCAGTAACAAAGCTCCACTGTGATGTCTCTGATGCGGTCAATGTCCTGACCCACACAAGCAAGGTGGATATAACTACTCAGCAACAAAAATGCATAAAAAAACTGCAAAATAAATATGCAAACCAAGACATGCATGAACTTTATTGTGAAGCACCTAGTGATGTTGATGGAAGACCTATATTAATTTTGAGTCATGATGGAAGGGCAGAGAATGGAGTTAACAGTTTTTCTTCTAGTAGCCAAATAGATGAATGTGTTTCATCAGTGTCTGAAGGCTTGACTAGGAAGCTAGAAACACCGGATAGAGAACAATTTGATGAGAGCAGAGACTGCTCTGCTACCGGCAGGAATGTTGCTGAAAGGAGTTCTTCTGCAGAGGATCGTGTTAGCATAATATCTGCTGAAGTTCCAGATCTTTGCAAGACTTTGGAACAGGAACATGAACATATCCATTCTACATGTCACTTAGCCTCGGGCCATAGTGGCAATAAAAAGGACACAATGGGGACTGATTTTCTAGACAAAGTTTCTGATGATCCAGAGTTCCAACTATCAAAACAAGGCCTAGTAAAAGATTCTGTTGAAACTAATAATGGATCCGAAGTTGTCCTTGGTGGTGCTGTTTGGGATATCTTCCGTCGGCAAGATGTGCCAAAACTAATAGAGTACCTAAGAAAGCACAAGAAGGAATTCCGTCACCTTTGCAACTATCCTGTGAATTCTGTTATACATCCCATTCATGATCAGACTCTATTCTTAAATGAGAAACATAAAAAACAACTGAAACAAGAGTTCAATGTTGAACCCTGGACTTTTGAGCAACACCTTGGTGAGGCTGTTTTTATTCCTGCTGGGTGTCCACATCAAGTGAGAAATAGACAATCTTGTACAAAGGTAGCACTTGATTTTGTTTCTCCGGAAAATATTGAGGAATGTTTACGGCTAACTGAAGAGTTTCGTTTGCTCCCAAAAAGCCATAGAGCCAAGGAGGACAAATTAGAGGTTAAAAAGATGACTCTTTATGCTGTAAGTTCGGCTGTTAGAGATGTTAAAAGACTGATGAAGGCTACTGATTAA 2184 0.4121 MGQLNAFIINGSDNCNTSIVGFYRSCSNPSCSYDLCLTCCQELRNCCQPGGIEAETSYKQFVEKDWNQDSTRIHSKTHGERYGWESQFAPTVSCFPTDGTSLFPEWRANNDGNIPCPPKQRGGCGAALLELRRIFKADWVMKLLKNAEDLTRDYTPPLDVDLSAKCSLCQPNLVEGKINYEVRQAAHRDDGQDNFLYSPNALDMSDDEIEHFQRHWMRGEPVIVRKVLDKTSGLSWEPMVMWRAFRETGSRVKFKEETRSVKAIDCLDWCEVEINIHQFFKGYLEGRMHKTKWPEMLKLKDWPSSTLFEERLPRHCAEFFTALPYRDYTDPKSGLLNFASKLPDGSLKPDLGPKTYIAYGFSDELGRGDSVTKLHCDVSDAVNVLTHTSKVDITTQQQKCIKKLQNKYANQDMHELYCEAPSDVDGRPILILSHDGRAENGVNSFSSSSQIDECVSSVSEGLTRKLETPDREQFDESRDCSATGRNVAERSSSAEDRVSIISAEVPDLCKTLEQEHEHIHSTCHLASGHSGNKKDTMGTDFLDKVSDDPEFQLSKQGLVKDSVETNNGSEVVLGGAVWDIFRRQDVPKLIEYLRKHKKEFRHLCNYPVNSVIHPIHDQTLFLNEKHKKQLKQEFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCTKVALDFVSPENIEECLRLTEEFRLLPKSHRAKEDKLEVKKMTLYAVSSAVRDVKRLMKATD 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1310 727 ProSiteProfiles JmjC domain profile. 331 689 IPR003347 -
Bisa10g1310 727 SUPERFAMILY Clavaminate synthase-like 209 717 - -
Bisa10g1310 727 SMART cupin_9 312 689 IPR003347 -
Bisa10g1310 727 MobiDBLite consensus disorder prediction 466 483 - -
Bisa10g1310 727 Gene3D Cupin 504 698 - -
Bisa10g1310 727 Gene3D Cupin 198 448 - -
Bisa10g1310 727 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 13 724 IPR045109 GO:0032454|GO:0033169
Bisa10g1310 727 MobiDBLite consensus disorder prediction 466 496 - -
Bisa10g1310 727 Pfam JmjC domain, hydroxylase 574 672 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1310 Bisa-ChrBisa10 33306659 33311837 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa10g1310 JmjC 3.7e-16 CL0029