Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa10g1290 | ATGGGAAGAGCTCCATGCTGTTCAAAAGTAGGGTTACACAGAGGGCCATGGACTCCTAAAGAAGATGCATTGCTTGCTAAGTATATTCAAGCTCATGGTGAGGGTCAGTGGAGATCCCTTCCCAAAAGAGCTGGGCTTCTAAGATGTGGAAAAAGTTGCAGGCTTCGATGGATGAACTATCTAAGACCAGACATAAAGAGAGGGAACATAACTCCCCAAGAAGACGACCTTATCATCAGAATGCACTCTCTTCTGGGAAACAGATGGTCCCTCATCGCTGGAAGATTACCTGGACGAACAGATAATGAAATCAAGAACTACTGGAACACCCATCTCAGCAAGAAACTCAAGGCCCAATTAGGACCCCATTATCACGAGGCTGTCATAGCAAAGCAGAGAAATAACAACAACAACAACAACAACAACAAAAAGAAGAAAAAGAAGACGGTCAAGAACAACAACAAGAACAAAACGAAAAGTAGTAGTAATAATGTGAAGATCGTGGAGGAGGAAGAGGAGAACAAGAAGACGAATGTTTATCTTCCAAAACCAATTAGGGTTAGGGCTTTGACTGTAGAAAGAAATAGTAGCACCACCACTTTGACCGTAGACTCCAACAATGGTTCTTCTTCAAGCCAAGACAAGGAAGGAAGCCCAGAATTATTACAGAATAGTAAAGAGGTGAATGTTTGGGGTGAAATTAATTACGATGAGTTCGGTTTTTTTGGTGAAGAAGGGAATAACATTTATAACGTTGACTTGATCAACGTAGGATATTTATCTGAAGAGAATAATTACATGGAATGCGAATCGTCACTGGAGAGGCTGTATGACGAGTATTTTCAGCTTTTGAAGAGCAATAATTGTGAGGAGAACCAAGGGGAGTTGGATTCTTTTGCTCAATCTTTGTTTGTATGA | 918 | 0.4096 | MGRAPCCSKVGLHRGPWTPKEDALLAKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPQEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLKAQLGPHYHEAVIAKQRNNNNNNNNNKKKKKKTVKNNNKNKTKSSSNNVKIVEEEEENKKTNVYLPKPIRVRALTVERNSSTTTLTVDSNNGSSSSQDKEGSPELLQNSKEVNVWGEINYDEFGFFGEEGNNIYNVDLINVGYLSEENNYMECESSLERLYDEYFQLLKSNNCEENQGELDSFAQSLFV | 305 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa10g1290 | 305 | Gene3D | - | 14 | 66 | - | - | |
| Bisa10g1290 | 305 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Bisa10g1290 | 305 | MobiDBLite | consensus disorder prediction | 130 | 174 | - | - | |
| Bisa10g1290 | 305 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
| Bisa10g1290 | 305 | Gene3D | - | 71 | 116 | - | - | |
| Bisa10g1290 | 305 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
| Bisa10g1290 | 305 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Bisa10g1290 | 305 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Bisa10g1290 | 305 | MobiDBLite | consensus disorder prediction | 140 | 154 | - | - | |
| Bisa10g1290 | 305 | MobiDBLite | consensus disorder prediction | 198 | 223 | - | - | |
| Bisa10g1290 | 305 | FunFam | Myb transcription factor | 11 | 67 | - | - | |
| Bisa10g1290 | 305 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Bisa10g1290 | 305 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Bisa10g1290 | 305 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
| Bisa10g1290 | 305 | CDD | SANT | 71 | 112 | IPR001005 | - | |
| Bisa10g1290 | 305 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 222 | - | - | |
| Bisa10g1290 | 305 | FunFam | MYB transcription factor | 68 | 128 | - | - | |
| Bisa10g1290 | 305 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Bisa10g1290 | 305 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa10g1290 | Bisa-ChrBisa10 | 32737509 | 32739557 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa10g1290 | 4 | 130 | MYB Transcription Factor Family | AT3G13540 | 70.312 | 8.52e-65 | 202 |
Transcription factors information