Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1263 ATGTTAGGTCACACGGAATGTTCAACTTCCGCGGAAGCGGAAGCCGAGACCTACAGCAGCACAATCACTTCATCGTCAACAACAACAACAATCAGTGTCGCGAGGAATAAGAAGAAGAGCAAGAACAGGAGAAGGTTCAGCGACGAACAGATCAAGTCATTGGAGTCGATGTTCGAGACAGAGTGGAGGCTGGAGCCGCGGAAGAAGGCGGAGGCGGCTCGCGAGCTGGGGCTGCAGCCGCGTCAGGTGGCTATTTGGTTCCAGAACAAGCGGGCTCGATCGAAGGCCAAGCAGCTCCTACGCGACTTCAACGCCCTCCGAGCCGATTACAGCACCTTGGCTTCCAGATTTGAAGCTCTCAAGAAGGAGAACCACGCCTTGCTCATTCAGTTGCAGAAGCTGAATGATCCAGTGCAAGAGCCAGGAGATCAAAGTGGATGTTGCAGGGAAGTGAAATTATCTGCAAATAATAGCATGGATAGAGAATCGGACAATGGAGAGACCATGAAATGTGAAGCAGAGGTTAAGCCAAGCCCATCAATGGAGAGATCAGAACAAGTGCTTGGAGTTCTTTCGGACGAAGATGGCAGCATGAAGGCAGAGTTCTTCGGCATCCAAGGTCAACCCAACCTTCTGAATTTCGATGATCGGAATGGTGATGCTTCGTTGGCATCACCAGAAGATTGGGGAAGGTTTGAATCTGATGATCTGTTAGGCCAGTCTGGTGGTGGTTATCAATGAAAAGCGTCTCAAGCAGCCACAAGAACAGTGATGAACAACTTGTCCAATGCTGCTTTGAGCGACACCAACGATCACTTCAGCAGCTTCAAGCCGGTTCCAACCCTCGCTATTTTCATTTTGGTCCCTCTTTTCTTACTGGGTCTCGCCGTGTCCGTCTTCTTCCTCATTGTGGTTCACAATGCAGCCTTCTTTGTCTCCTTCGTTCTGCTCTCGTCTTTCGTTCTCGCTTTCATTGGTTGGAACACCCACAACTGGAGGAAGAAAGGTGCAATTTTTCTCTTCCTTCGCTCTTTTCCCGACTCTGACATTCGCTGCGCGAAAGAGGGGCAGCTCGTCAAGATAACTGGGCTTGCAACGTGTGGCAGTGTCTCACTGGAATCTTCATATGAAAAGGCAACCAGATGTGTCTATGCATCCACCCTTTTGTATGAATGCAGAGGATTTGGATTGAGACCAGTGAATATCAACAAATCATGCTTTCGGTGGAATTTAGCATATTGTGAGAGGTTCTCAACAGACTTCTACATAACTGACCAGAAATCTGGTACAAGGGTAGTGGTGAAAGCTGGTTCCGGCAGCAAGGTTATACCGTTAATTGCAGAGAGCAAAATTATCCATACCACAGGACAATGCAGAATCTTATCTCCTCACTTGAGAAAATGGTTAAAAGACAGAAACCTCTCCACCGAAGCCCGCTTTCTACGTCTAGAAGAAGGGTATGTACAGGAAGGTAGCTCAGTAACGGTAATCGGAACATTGCATAGAAACGACGACATTGTCATGGTCATCGAACCACCGGGGGTCATCTCCACCAGTTGTTTGTGGCAAAAGCTTCTTCTCCCCATAGACATTGATGGAATCATCATTGGGATCTCTCAGATGGCTGTCCCTATGACCACCAACGAGTCAGGACAACCCATACAACAGTAA 1671 0.4823 MLGHTECSTSAEAEAETYSSTITSSSTTTTISVARNKKKSKNRRRFSDEQIKSLESMFETEWRLEPRKKAEAARELGLQPRQVAIWFQNKRARSKAKQLLRDFNALRADYSTLASRFEALKKENHALLIQLQKLNDPVQEPGDQSGCCREVKLSANNSMDRESDNGETMKCEAEVKPSPSMERSEQVLGVLSDEDGSMKAEFFGIQGQPNLLNFDDRNGDASLASPEDWGRFESDDLLGQSGGGYQXKASQAATRTVMNNLSNAALSDTNDHFSSFKPVPTLAIFILVPLFLLGLAVSVFFLIVVHNAAFFVSFVLLSSFVLAFIGWNTHNWRKKGAIFLFLRSFPDSDIRCAKEGQLVKITGLATCGSVSLESSYEKATRCVYASTLLYECRGFGLRPVNINKSCFRWNLAYCERFSTDFYITDQKSGTRVVVKAGSGSKVIPLIAESKIIHTTGQCRILSPHLRKWLKDRNLSTEARFLRLEEGYVQEGSSVTVIGTLHRNDDIVMVIEPPGVISTSCLWQKLLLPIDIDGIIIGISQMAVPMTTNESGQPIQQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1263 556 Coils Coil 89 109 - -
Bisa10g1263 556 PANTHER OSJNBA0035M09.9 PROTEIN 251 540 IPR040339 -
Bisa10g1263 556 ProSiteProfiles 'Homeobox' domain profile. 37 97 IPR001356 GO:0003677
Bisa10g1263 556 SUPERFAMILY Homeodomain-like 20 98 IPR009057 -
Bisa10g1263 556 SMART HOX_1 39 101 IPR001356 GO:0003677
Bisa10g1263 556 Pfam Homeobox associated leucine zipper 97 136 IPR003106 GO:0006355|GO:0043565
Bisa10g1263 556 Gene3D - 28 99 - -
Bisa10g1263 556 Pfam Homeodomain 41 95 IPR001356 GO:0003677
Bisa10g1263 556 CDD homeodomain 41 98 IPR001356 GO:0003677
Bisa10g1263 556 PRINTS Lambda-repressor HTH signature 68 77 IPR000047 GO:0003677
Bisa10g1263 556 PRINTS Lambda-repressor HTH signature 77 93 IPR000047 GO:0003677
Bisa10g1263 556 FunFam Homeobox-leucine zipper protein ATHB-7 24 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1263 Bisa-ChrBisa10 31952498 31960986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1263 45 232 Homeobox Transcription Factor Family AT3G61890 46.875 3.45e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa10g1263 Homeodomain 2.9e-14 CL0123