Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1259 ATGGGCCAGTGTTACGGCAAGAGCAATCTCACCGGAGGGAATGACGATGCCCGAAATACAACCACTATTGTTGCCGATTCCGGTGCCGCGCCGCAGTCGCCGCTGCCGTCGGGGAGCGTCCCCGACGGCAACGGGATTCCGTCGGTGAAGAATACCCCTGCTCGGTCGTCCAACGCGAGCCCTTGGCCGAGCCCGTACCCGCATGGCGTCAACGCGAGCCCCTATCCCGGCGGTGTATCGCCGTCGCCGGCGAGGTCGTCCACTCCGAGGAGGTTTTTCCGGCGACCGTTTCCTCCGCCGTCGCCGGCGAAGCATATCAGGGCGTCGCTGGCTAAGAGGCTTGGGCACGGGAGGCCCAAGGACGGGCCGATCCCCGAGGACCGTGGAACGGAACCGGAGCAGGCGCTAGACAAGAGCTTTGGGTATAGTAAAAATTTTGGAGCGAAGTATGAGTTAGGGAAGGAAGTGGGGAGAGGGCATTTTGGTCATACGTGCTCTGCAAGGGGCAAGAAGGGCGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGCGAAGATGACAACGGCGATAGCAATTGAAGATGTTCGTAGAGAGGTTAAGATGTTGAAAGCTCTATCTGGCCATAAGCATCTCGTCAGATTTCATGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTCCTTGATAGAATTTTGTCAAGGGGAGGAAGATATACAGAGGAGGAAGATGCAAAAAATATAATTTTGCAGATTCTAAGCGTTGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTAAAACCTGAGAATTTCCTTTTCACTTCAAGAAGCGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATCAGGCCAGATGAAAGACTAAATGACATTGTTGGAAGTGCATACTATGTTGCACCTGAGGTCCTTCACAGATCATATAGCCTGGAAGCAGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTAGAACAGAATCTGGAATTTTTCGTGCAGTGCTCAGAGCAGATCCTAACTTTGATGATTTACCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTGAAAAGGCTGTTGAACAAGGACTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGACAGGCGTCCTATACCTTTAGATATATTAATTTATAAATTGGTGAAGTATTATCTTCAAGCATCACCATTCAAACGTGCAGCACTAAAGGCCCTTTCGAAAGCCTTGACAGAGGATGACTTGGTGTATCTTAGAGCACAGTTCAGATTGTTAGAACCAAACAGAGATGGCTATGTCTCGCTTGACAATTTCAAAATGGCTCTTCTACGAAACTCAACTGATGCCATGAGGGAGTCAAGGGTTCTTGATATTTTACATTTGATGGAACCGCTTGCTTATAGGAAGATGGACTTTGGAGAATTTTGTGCAGCTGCAATTAGCACATACCAATTAGAGGCACTTGATAGGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTTGAGAGAGATGGCAACCGTGTGATATCGGTCGAAGAACTAGCAAGAGAGTTGAATCTGGGTCCTTCGGCTTATTCTATTCTCAGAGATTGGATTCGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTTACACTGCGTAGTTCAAACACAAGACACCATTAA 1812 0.4746 MGQCYGKSNLTGGNDDARNTTTIVADSGAAPQSPLPSGSVPDGNGIPSVKNTPARSSNASPWPSPYPHGVNASPYPGGVSPSPARSSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGRPKDGPIPEDRGTEPEQALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKHLVRFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEEDAKNIILQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDRRPIPLDILIYKLVKYYLQASPFKRAALKALSKALTEDDLVYLRAQFRLLEPNRDGYVSLDNFKMALLRNSTDAMRESRVLDILHLMEPLAYRKMDFGEFCAAAISTYQLEALDRWEHIASTAFEHFERDGNRVISVEELARELNLGPSAYSILRDWIRNTDGKLSLLGYTKFLHGVTLRSSNTRHH 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1259 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Bisa10g1259 603 Gene3D Transferase(Phosphotransferase) domain 1 239 420 - -
Bisa10g1259 603 SUPERFAMILY Protein kinase-like (PK-like) 145 434 IPR011009 -
Bisa10g1259 603 FunFam CDPK-related kinase 1 143 238 - -
Bisa10g1259 603 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Bisa10g1259 603 Pfam Protein kinase domain 150 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1259 603 CDD STKc_CAMK 149 412 - -
Bisa10g1259 603 Gene3D - 421 593 - -
Bisa10g1259 603 SUPERFAMILY EF-hand 439 592 IPR011992 -
Bisa10g1259 603 Gene3D Phosphorylase Kinase; domain 1 143 238 - -
Bisa10g1259 603 FunFam CDPK-related kinase 3 142 315 - -
Bisa10g1259 603 MobiDBLite consensus disorder prediction 1 64 - -
Bisa10g1259 603 SMART serkin_6 150 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1259 603 FunFam Calcium-dependent protein kinase SK5 323 418 - -
Bisa10g1259 603 MobiDBLite consensus disorder prediction 114 134 - -
Bisa10g1259 603 FunFam CDPK-related kinase 1 449 521 - -
Bisa10g1259 603 MobiDBLite consensus disorder prediction 1 135 - -
Bisa10g1259 603 ProSiteProfiles Protein kinase domain profile. 150 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1259 603 ProSitePatterns Protein kinases ATP-binding region signature. 156 182 IPR017441 GO:0005524
Bisa10g1259 603 PANTHER SERINE/THREONINE-PROTEIN KINASE 134 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1259 Bisa-ChrBisa10 31844017 31851621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1259 1 597 EF-hand Containing Proteins AT3G50530 58.009 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa10g1259 Pkinase 4.3e-68 CL0016