Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1256 ATGGAGGACTTGATTATCTCCCCTTCTTCGTCTTCTTCTCTGGTGTCTCTGTCTCTGCCCCGAGACACCCAACCCACCCTTCAGCGAAAGCTTCAATTTCTACTCCAGAGTCAACTCGACCCGTGGGTCTACGCCATTTTCTGGCAGGTTTCAAACGACGACGTTAATGGCACTCTATTCTTGTCATGGGGAGAAGGCTATTTCAATGGCACCAAAGACAATTCTCCTAGACTCTCTTCCAACATCACTCAGCAATACCCACGGATTCAATCCGACAGAACCAGGTTCTTGAACGGCATACAAAATATCATGCACCACAATAACAATAACATTTGCAGTGATCTCCATGATACCGAGTGGTTTTACGTCATGTCGTTGGCTCGCACTTTCTCTCTCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTCCCTGGGAAAGCCTTCAGTTCTAATTCTCCCTTGTGGTTGAACGGCGAGAGGGAGCTTCAGTTCTGCAATTGCGAAAGAACCAAAGAGGCTTACCTTCACGGAATTGAGACTCTCGTATGTATCCCGACTAATCATGGTGTTCTCGAAATGGGTTCCTCTGATCTCATCGTAGAAAACTGGAGTCTCGTCCAACAATCTAAAGCTCTGTTCGGGTCAGATCTTATTACCAGCCAACCCAGTACCAACCCAATTCAGTTCTTCAACGATCAGAACATCTCCTTCTCCGACATCGGCATCATCGCCGGCGTACGGGAGGAGGAGGAAGGAGAAGACGATTCCCCTGTTCCCGAGAAAAACAATAAAAGGAAGAAGATGGGACAGAGGAATACCGGAGATTCATGTCTCAAATTCGGATCTCAGTTCGCAGATTCGGAGCACTCTGACTCGGATTGTATAGAGAAAAGAACCCCAAAGAAGAGAGGACGAAAGCCCGGACTCGGCCGCGAAACGCCGTTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTAAACCACCGATTCTACGCGCTGCGCGCGGTGGTCCCGAACGTCTCGAGAATGGACAAAGCCTCTCTGCTATCCGACGCCGTCGATTACATCAACGAGCTCAAGTCGAAGATCGAAGATCTAGAATCTCAGATTCAAAAAGAATCCACCACCACTACCAACAATAATAGCAAGAAGGTGAAATTGGAAATGGCGGATACTACGGACAACCAGAGCACGACGACGTCGACGGTGGACCAAACGACGCCGTCGGGGTGTGGCATTGAGGTGGAGGTTCGAATCATAGGACCGGAAGCCATGGTTAGGGTTCAGTCGGAGAACGCGAACCACCCGGGGGCGAGGCTGATGGGAGCGTTGCGAGACTTGGAGCTAGGGGTACGCCATGCGAGCATGTCGTGCGTGAACGAGCTCATGCTTCAGGACGTGGTGGTGAAGACGCCGGAGGAGTTAAGGAACGAGGAGAGTCTCAAATCTGCGATTCTGCAGAGATTGGGTCTCAAGGAAGAAGAAGGAACGTAA 1500 0.5067 MEDLIISPSSSSSLVSLSLPRDTQPTLQRKLQFLLQSQLDPWVYAIFWQVSNDDVNGTLFLSWGEGYFNGTKDNSPRLSSNITQQYPRIQSDRTRFLNGIQNIMHHNNNNICSDLHDTEWFYVMSLARTFSLASSSSSSSSSLPGKAFSSNSPLWLNGERELQFCNCERTKEAYLHGIETLVCIPTNHGVLEMGSSDLIVENWSLVQQSKALFGSDLITSQPSTNPIQFFNDQNISFSDIGIIAGVREEEEGEDDSPVPEKNNKRKKMGQRNTGDSCLKFGSQFADSEHSDSDCIEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVDYINELKSKIEDLESQIQKESTTTTNNNSKKVKLEMADTTDNQSTTTSTVDQTTPSGCGIEVEVRIIGPEAMVRVQSENANHPGARLMGALRDLELGVRHASMSCVNELMLQDVVVKTPEELRNEESLKSAILQRLGLKEEEGT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1256 499 Gene3D - 310 377 IPR036638 GO:0046983
Bisa10g1256 499 Pfam Helix-loop-helix DNA-binding domain 316 361 IPR011598 GO:0046983
Bisa10g1256 499 MobiDBLite consensus disorder prediction 373 410 - -
Bisa10g1256 499 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 27 213 IPR025610 -
Bisa10g1256 499 MobiDBLite consensus disorder prediction 248 323 - -
Bisa10g1256 499 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 374 IPR036638 GO:0046983
Bisa10g1256 499 CDD bHLH_AtAIB_like 310 374 - -
Bisa10g1256 499 PANTHER MYC 18 490 IPR045084 GO:0003700|GO:0006355
Bisa10g1256 499 MobiDBLite consensus disorder prediction 289 323 - -
Bisa10g1256 499 SMART finulus 318 367 IPR011598 GO:0046983
Bisa10g1256 499 Coils Coil 351 378 - -
Bisa10g1256 499 MobiDBLite consensus disorder prediction 257 272 - -
Bisa10g1256 499 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1256 Bisa-ChrBisa10 31738724 31740223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1256 1 492 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 34.035 1.80e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa10g1256 bHLH-MYC_N 2.1e-46 CL0161