Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1244 ATGGGGAAGAAGGGAGGCACCTCATGGTTGACCGCTGTGAAAAGAGCATTTAGATCTCCCACCAAAGACACCGACAAAAGGAACCAAGAAGAAGACGAAGACAAGAGGAGAGAAAAACGACGATGGCTTTTCAGAAAACCAGCGAATCAGGACGCGACGGTGAGTACCCAACAAACCCTGACAAAGGAGAAGCTCGATTCGGCTGCAAGAACGGTTGAGCATGTGCCGCCAGCGGCGGCAGCGGTGACGGATCAGAAGAATGCGCTTGTGGCGGCGGTGGCGAAGGCGGAGGCCGCCATGGTCACCGCTCAGGCCGCGGTGGAGGTGGCCAGAATGACGAGGCCGTCGAATCAAGCTCGTGAGCACTATGCAGCCACTGTGATCCAAACTGCTTTCAGAGGATATCTAGCAAGAAGGGCACTTCGAGCACTGAAGGGGCTAGTGAAGCTGCAAGCTCTAGTGAGGGGTCATAATGTTCGAAAGCAAGCGAAGATGACCCTTCGGTGCATGCAGGCTCTGGTTCGAGTACAAGCCAGAGTGCTAGACCAGCGCTTGAGGTTCTCACACGAAAGCAGTAGCAGAAAATCCACATTCAGTGACACCAACAGTGTGTGGGAATCACGGTATCTTCAGGACATTTCAGATAGGAAATCGATGTCAAGAGAAGGAAGCAGTATTGCAGATGACTGGGATGAACGACCTCACACTGTTGAAGAAGTTAAAGCGATGTTGCAGCAGAGGAAAGAAGCAGCTATGAAGCGAGACAAGTCCTTGTCTCAAGCTTTCTCTCAACAGATTTGGAAGAATGGAAGGAACTCATCGATTGGAAATGAAGATGAACTGGATGGGAGACCGAAGTGGCTCGACCGGTGGATGGCGTCGAGGCCATGGGAGACTAGAGGAAGAGTTTCAACTGACCAAAGAGACACCATTAAAACTGTAGAAATTGACACCTCTCAGCCTTACTCATATCTAGGAGCTAATTATAGAAGATCACATCCAAATTATCAATACAACCCACCCCAACCACAAAGGCACTCAGTGGCTTCCCCACTCCACAGAACCCACCAAAACAGTTCTCTTCACCAATCCTCTGCAACCCCATCACCTGCAAAATCACGGCCTATCCAGGTCCGGTCTGCGAGCCCTCGGTGTGGAAGAGAAGATAGAACCTACCCTACATCTCAAACACCAAGCTTGAGGTCCAATTACCATTACACTGGAAGCTTGTATGGAAGAGTTGGAACAAGCAACAGTGGTGGGAGTGGGACTACACTGCCTAATTACATGGCAGCGACAGAATCTGCAAAGGCGCGAGTCCGATCTCACAGTGCACCAAGGCAGAGGCCGTCAACGCCAGAAAGGGACAGAGCCGGGTCGGCCGCGAAGAAGAGGCTTTCGTTCCCTAATGCTCCTGAACCTTATGCAATGGGGTATGGGAGTTGTTATGGACATAGTTTGAGAAGTCCAAGCTTCAAGAGTGTGAGTGCTTCACACTTTGGGTTGGAGCAGCAGTCCAACTATTCTTCTTGCTGCACTGAGAGTCTTGGAGGTGAGATTTCTCCATCTTCAACTGGGGACCTTAGAAGGTGGTTGAGATGA 1602 0.5075 MGKKGGTSWLTAVKRAFRSPTKDTDKRNQEEDEDKRREKRRWLFRKPANQDATVSTQQTLTKEKLDSAARTVEHVPPAAAAVTDQKNALVAAVAKAEAAMVTAQAAVEVARMTRPSNQAREHYAATVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRLRFSHESSSRKSTFSDTNSVWESRYLQDISDRKSMSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKSLSQAFSQQIWKNGRNSSIGNEDELDGRPKWLDRWMASRPWETRGRVSTDQRDTIKTVEIDTSQPYSYLGANYRRSHPNYQYNPPQPQRHSVASPLHRTHQNSSLHQSSATPSPAKSRPIQVRSASPRCGREDRTYPTSQTPSLRSNYHYTGSLYGRVGTSNSGGSGTTLPNYMAATESAKARVRSHSAPRQRPSTPERDRAGSAAKKRLSFPNAPEPYAMGYGSCYGHSLRSPSFKSVSASHFGLEQQSNYSSCCTESLGGEISPSSTGDLRRWLR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1244 533 MobiDBLite consensus disorder prediction 1 69 - -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 389 404 - -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 49 65 - -
Bisa10g1244 533 PANTHER IQ-DOMAIN 5-RELATED 1 470 - -
Bisa10g1244 533 FunFam IQ-domain 11 120 171 - -
Bisa10g1244 533 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Bisa10g1244 533 SMART iq_5 143 164 IPR000048 GO:0005515
Bisa10g1244 533 SMART iq_5 120 142 IPR000048 GO:0005515
Bisa10g1244 533 MobiDBLite consensus disorder prediction 323 376 - -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 513 533 - -
Bisa10g1244 533 Pfam IQ calmodulin-binding motif 124 142 IPR000048 GO:0005515
Bisa10g1244 533 Pfam IQ calmodulin-binding motif 148 164 IPR000048 GO:0005515
Bisa10g1244 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 165 IPR027417 -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 448 462 - -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 18 46 - -
Bisa10g1244 533 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Bisa10g1244 533 Pfam Protein of unknown function (DUF4005) 382 480 IPR025064 -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 433 469 - -
Bisa10g1244 533 MobiDBLite consensus disorder prediction 323 404 - -
Bisa10g1244 533 Gene3D - 119 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1244 Bisa-ChrBisa10 31468101 31470146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1244 1 533 IQD Protein Family AT1G01110 58.707 0.0 530