Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1243 ATGAGCATCTCCGTGAATGGACAATCCCAGGTCCCTCCTGGGTTCAGATTCCATCCAACGGAAGAAGAGCTGTTGCAGTACTACCTGAGGAAGAAGGTCTGCTACGAGAAGATCGACCTTGACGTTATTCGCGACGTCGATCTCAACAAGCTCGAACCTTGGGACATCCAAGAGAAGTGCAAGATAGGGACCACCCCGCAGAACGATTGGTACTTCTTCAGCCACAAGGACAAGAAGTATCCGACCGGAACCCGGACGAACCGGGCGACGGCGGCTGGGTTCTGGAAGGCGACGGGGCGGGACAAGGTGATATACGGCAACGGCAAGAGGATTGGAATGAGGAAGACTCTGGTTTTCTACAAAGGCCGTGCTCCTCATGGCCTAAAGTCCGATTGGATCATGCATGAGTATAGGCTGGAAGATAATATCACCACCGAGCCCAGCATTGTGTCGAATGTGATAGGAGACGGAGGTCAGGAAGAAGGGTGGGTGGTGTGCAGGATATTCAAGAAGAAGAACCATCTCAAAACCCTAGAGAGTCCCTTGGCTTCGTCCATCACAGGGGGAACCAGAAGTTCAAGTAGTCACTATCACCACGACTTTGACGACGACGAGGGAGCTTTGGACCAAATACTTCAGCAAATGGGAAGAAACTACTGCAAGGAAGAAGAAGAAAACGATCCCACCACGATCACAAACAGCAACTCAAGAGTTGCCAGACCATTTGACGACTCCGCCATTAACACCAACAACAACTACAACAACAACAGCTACTACTACCACGACAGGTACTCGAAGCTTCCTCGCCTAGAAAGCCCAAAATCCAACAACAACACATACCATCCCATCATTGAAGGAGTCTCATTTGGTGGTGACGATTCCAATTCCAATAGTGGCCTTATTACCAACTGGGCAGCACTGGATCGTCTTGTAGCTTCGCAATTGAATGGCCAGAGTTGTTTCAATACTACGACTGCTACTCTAGACCCAACCATGGCTTTTTGCTCTAGTGATCATGTTCATGATCTGCAACTTCCGACCCTACGATCCTCATCGTCTTCGATATCAATAACGTCGTCGTCTTTGGCAAACCACAACAGAGCTGATAATTACATTAGTGCCACGCAGGATAATAACTACACCAGCAGCGAGATTGACCTCTGGAACTTTGCCCGATCCACATCATCGCTAGTGTCATCCTCGGAACCGCTGTGCCACGTGTCAAACACATCGTCAGTGTAG 1242 0.4944 MSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVCYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYGNGKRIGMRKTLVFYKGRAPHGLKSDWIMHEYRLEDNITTEPSIVSNVIGDGGQEEGWVVCRIFKKKNHLKTLESPLASSITGGTRSSSSHYHHDFDDDEGALDQILQQMGRNYCKEEEENDPTTITNSNSRVARPFDDSAINTNNNYNNNSYYYHDRYSKLPRLESPKSNNNTYHPIIEGVSFGGDDSNSNSGLITNWAALDRLVASQLNGQSCFNTTTATLDPTMAFCSSDHVHDLQLPTLRSSSSSISITSSSLANHNRADNYISATQDNNYTSSEIDLWNFARSTSSLVSSSEPLCHVSNTSSV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1243 413 Gene3D NAC domain 20 176 IPR036093 GO:0003677|GO:0006355
Bisa10g1243 413 MobiDBLite consensus disorder prediction 229 247 - -
Bisa10g1243 413 SUPERFAMILY NAC domain 7 171 IPR036093 GO:0003677|GO:0006355
Bisa10g1243 413 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 259 - -
Bisa10g1243 413 MobiDBLite consensus disorder prediction 222 247 - -
Bisa10g1243 413 FunFam NAC domain-containing protein 20 175 - -
Bisa10g1243 413 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Bisa10g1243 413 ProSiteProfiles NAC domain profile. 11 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1243 Bisa-ChrBisa10 31435808 31437547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1243 1 411 NAC Transcription Factor Family AT2G46770 53.991 3.96e-137 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa10g1243 NAM 1.8e-35 No_clan