Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1234 ATGGAGGTGAGGTTGGAGACGGAGGACGAGCTGAGCATGGCGAAACAGCAGAAGGATGATAGCTCCAGAGAAATGGTTAAGTGGGACAAGTTTATACCCCGGATGGTGCTCAGAGTTTTGCTGGTGGAAGCTGATGACTCTACTCGGCAGATTATCGCTGCCCATCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGACTGAAGGCATGGGAGACATTGAACAGGAGAGCTCCTGACATAGATCTCATATTAACTGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTTCTTACTTTAATTAAGGAGCATGACATCTGTAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAATTAGCATGACATTGAAATGCATATTAAAAGGTGCAGCTGACTTTCTTATAAAGCCTGTTCGAAGGAATGTGCTAATGACCTTGTGGCAACATGTGTGGAGAAGGCATCCTGAAAAACTTGAAGCTACTTCAGAAAACAATGCTGCCAGCAACCATTCAACTGGTTCTGCGGCTTCCATAAAGAAAGATAATGAATACAGTGAGAAAGGAAGTGAGGCCCAAGGTACATTTCAGGCCAGGAGTTCTACAAATTTCAGCAACATTGACACAGTGAGGTATAAAGAATCTACAAAACATGAAAGGGAATCAGTTGATCATAATGATGGAACTACAAAGAGGGCAATTACTTCTGCATTAGAGGGTGCTAGGTGCAACAGAACTAGTAACTGGACAAATTTAAGGCTGGAGCAAGACCACAATTGTGCTGAAACAAAGAATCAAGATGAAGTTTCAAGAGCAGAGGTAATCAGGACCAATCCTAATTATGATACAGAGATAGATGGCTACAAGAATGAACTGGTAGAACCTTCTAGCGGAGCTATTGACTTGATTGCTGCATTTGAGAATCTTCCAAAGAATGCTGCTGATAAGAACTGTACTCTTAATGATGGTGGCACAAACGAGTTTGATTTTGATTCGCAGTTGGAACTCTCGTTAAGAAATTTTTCAGGTAGCTCGTATAAACAAGAAACTGAGGAAAGGCAAACACTGAACCATTCAAATGCATCTGCTTTTTCTTGGTACAGTAGTCGTAAGCTGCTGCAGCCCCTCTTTCCAGCACTATCAGTGGGTTCTGCTAAAGCTTATATCACTGAGTTGAATTCCCAGAATTCTAATGAAATATCTGGAACTGATACTTCTCTTCAGTATGGTGGGACAACACGTGTTCGGGAGGATGTGATCACGACAGTCATTGGTCAATCTGGACAAGTTGAAATTCAATTGCCAAACAGTCATTTGCAATCCTTGCCGGCTACTGGTGTTACTTCTGATCATATGTCCGGTCCATGTGGGAATGTTATGCCTTCTGTGTTCTACACACAATCTGGTGCTCATCACATATGGAGTCCCAAACCAGTCTTCCAGAAAGAGAATTCTCCCTTTCCCACAAGTGCTTCGTTCCAGTCAAATGCTGAAAGTCACAACTCAGAACAACATTATCATTGGTCTGATGATGCCACGTATGCCTCTCTTGATCAAAAAACTGCACCAGATGAAAGCTATTTGGATCCTGCAATGCATGATTATCCTGCTGCTGGTCAGAATACCAGCAATAGTTTAGGCCATAAGACTGCGAATCATATTAATAATGGTTCATATGGAAGCGTAGGTAGCAGAAAAGATGGAAATTATACTTCAGCTGTGGTAGTTGAGAAAACCCCTGAAAGTATTAGTGACAATTGTCATGATTACGATAAATATAGGGGGGCAGATTCTCAGCGCTCCAGCCAGAGGGAAGCAGCTCTAACTAAGTTTCGACTGAAGAGGAAAGAAAGATGCTATGAGAAAAAGGTCCGGTATCAAAGCCGAAAAAGACTGGCGGAACAGCGTCCTCGGATGAAAGGGCAGTTTGTACGTCAAGTGCAAAATGATCTTCCAGTCGCTGATTCTGGTGGGGATCTCTGA 1995 0.4251 MEVRLETEDELSMAKQQKDDSSREMVKWDKFIPRMVLRVLLVEADDSTRQIIAAHLRKCSYRVAAVSDGLKAWETLNRRAPDIDLILTEVELPSISGFALLTLIKEHDICKNIPVIMMSSHDSISMTLKCILKGAADFLIKPVRRNVLMTLWQHVWRRHPEKLEATSENNAASNHSTGSAASIKKDNEYSEKGSEAQGTFQARSSTNFSNIDTVRYKESTKHERESVDHNDGTTKRAITSALEGARCNRTSNWTNLRLEQDHNCAETKNQDEVSRAEVIRTNPNYDTEIDGYKNELVEPSSGAIDLIAAFENLPKNAADKNCTLNDGGTNEFDFDSQLELSLRNFSGSSYKQETEERQTLNHSNASAFSWYSSRKLLQPLFPALSVGSAKAYITELNSQNSNEISGTDTSLQYGGTTRVREDVITTVIGQSGQVEIQLPNSHLQSLPATGVTSDHMSGPCGNVMPSVFYTQSGAHHIWSPKPVFQKENSPFPTSASFQSNAESHNSEQHYHWSDDATYASLDQKTAPDESYLDPAMHDYPAAGQNTSNSLGHKTANHINNGSYGSVGSRKDGNYTSAVVVEKTPESISDNCHDYDKYRGADSQRSSQREAALTKFRLKRKERCYEKKVRYQSRKRLAEQRPRMKGQFVRQVQNDLPVADSGGDL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1234 664 Pfam CCT motif 608 650 IPR010402 GO:0005515
Bisa10g1234 664 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 330 IPR045279 GO:0009736
Bisa10g1234 664 MobiDBLite consensus disorder prediction 215 232 - -
Bisa10g1234 664 Gene3D - 35 278 - -
Bisa10g1234 664 SMART REC_2 37 152 IPR001789 GO:0000160
Bisa10g1234 664 ProSiteProfiles Response regulatory domain profile. 38 156 IPR001789 GO:0000160
Bisa10g1234 664 Coils Coil 4 24 - -
Bisa10g1234 664 MobiDBLite consensus disorder prediction 193 214 - -
Bisa10g1234 664 ProSiteProfiles CCT domain profile. 608 650 IPR010402 GO:0005515
Bisa10g1234 664 Pfam Response regulator receiver domain 39 150 IPR001789 GO:0000160
Bisa10g1234 664 SUPERFAMILY CheY-like 37 165 IPR011006 -
Bisa10g1234 664 MobiDBLite consensus disorder prediction 164 235 - -
Bisa10g1234 664 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1234 Bisa-ChrBisa10 31174247 31180328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1234 603 653 Response Regulator Gene Family AT5G24470 84.314 6.20e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bisa10g1234 Response_reg 2.7e-21 CL0304