Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1231 ATGGAGAGGCTTCAAGGACCCATCAATCCCTGTTTCTTCGGTGAGCATTTGAGTGAGAAGGGGAGAGAAGAAGAGCTGCTTCTGGTATCAAGCTTGGAGGATACAATGCCGTTTCTTGAGATGCTTCAGAGTGTGGAATCTCATTCCCCACAGTGTTTTCCCTTCAAAGACGCAAACTTTCAGACACTTGTACAGAACCCACTATTTGAAGAAGACAAGAAAGCCTGCATAATACCCAGAACAACAGAGGCCCAACTTCACGCGCCGCCGGAGCCGGAGAGCTGCGTCACCACCACCCATGACCCGGCGGAGGAGGGGATGCCGTGGCCGTCGTCGGCGAGGGCTGAGAATTGTAGGAGGAAGAGGAAGAGAACGAGGCCGATGAAGAACAAGGAAGACTTGGAGAATCAACGCATGACCCACATTGCCGTCGAACGTAACCGCCGCCGCCAAATGAACGACCACCTCGGTGTCCTCAGATCCTTAATGCCCCCCTCCTATATTCAAAGGGGTGACCAAGCTTCCATTATTGGAGGTGCAATAAACTTCGTGAAGGAATTGGAGCAGCTGCTTCAATCCCTAGAGGCAGAGAAAAGAGTGAGAAGGAACGAGGAAGTTGGATTCAGAACGACGTCGTGGGAGGAAGAAGCAAACTTGGGAGAAGAGGTAAAGGCAGAGAAGAAGTCAGAGATAGGAGAGATAGAGGTGACAATGATTCAAAGCCACGTGAACCTGAGAGTTGAGTGCAGAAGAAGAGGAGGGCAATTAATGAAAGCCATAGCTGGTCTTGAGAATCTCAGGCTCACTATTCTGCACCTAAACATAACCTCCTCACACTCCTCGGTTCTCTACTCTTTCAATCTCAAGATTGAAGAAGGATGTGAGCTAGTGTCAGCGAGTGAAATTGCAGGAGCCGTTGAAGAGATGTTCAGGTTCATCAATGGAGGAAGCTAG 954 0.4979 MERLQGPINPCFFGEHLSEKGREEELLLVSSLEDTMPFLEMLQSVESHSPQCFPFKDANFQTLVQNPLFEEDKKACIIPRTTEAQLHAPPEPESCVTTTHDPAEEGMPWPSSARAENCRRKRKRTRPMKNKEDLENQRMTHIAVERNRRRQMNDHLGVLRSLMPPSYIQRGDQASIIGGAINFVKELEQLLQSLEAEKRVRRNEEVGFRTTSWEEEANLGEEVKAEKKSEIGEIEVTMIQSHVNLRVECRRRGGQLMKAIAGLENLRLTILHLNITSSHSSVLYSFNLKIEEGCELVSASEIAGAVEEMFRFINGGS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1231 317 CDD bHLH_AtFAMA_like 139 208 - -
Bisa10g1231 317 MobiDBLite consensus disorder prediction 84 113 - -
Bisa10g1231 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 204 IPR036638 GO:0046983
Bisa10g1231 317 Pfam Helix-loop-helix DNA-binding domain 137 188 IPR011598 GO:0046983
Bisa10g1231 317 Coils Coil 184 204 - -
Bisa10g1231 317 SMART finulus 142 193 IPR011598 GO:0046983
Bisa10g1231 317 Gene3D - 126 216 IPR036638 GO:0046983
Bisa10g1231 317 PANTHER MAX DIMERIZATION, MAD 85 313 - -
Bisa10g1231 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 187 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1231 Bisa-ChrBisa10 31100232 31102579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1231 30 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 44.518 3.17e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa10g1231 HLH 1.6e-09 No_clan