Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1229 ATGCGGGAAGACGGAGACAGCCTCGTCTACGCCATGCAACTGTCGAACTCCACTGTTCTGCCCATGGCTCTGCAAGTCGCATTTGAGCTCGGCGTCTTTGACGCAATGGCCGGAGCCAGCGAAGGGGCGAGGCTCTCGGCAAAGGAGATCGCGGCGCTGGTTTGTTGCGAGAACCCAGAGGCGCCGGCGATGCTGGATCGGGTTCTGAGGCTGCTGGCTAGTCACTCTGTGGTGGATTGCAGAGTGGAGGAGGATGAAGAAGGGTCGAAACAGAGGATGTACGGTCTGTCCCCTGTTTCTAAGTACTTCGTCACTGATGTTAATGGCATTTCTCTTGGACCTGCCTTGGCCTTGACGAACGACAAGGTCTTCATGGAAAGCTGGAGGGAGCTAAAAGGCGCAATTAAGGAGGGAGGGATAGCATTCAACAGAGTACATGGGATGCATGCATTTGAGTATCCAAGGTTGGACCAAAGGTTCAATGATGTTTTCAACAAAGCCATGCACAACATCACTGCCCTTATCATGAACACCATTCTTAAGTCCTACAGTGGCTTTGTGCAGTTCAACAAGATTGTGGATGTTGGAGGTGGTCTTGGGGTCAACCTTTCTTTGATCACTTCCAAGTACCCTCATGTTCAAGGGATCAACTTTGACTTGCCTCACGTCTTAAAATATGCCCCTAATTATCCAGGTGTACAACATATGGGAGGTGATATGTTTGAAAGTGTTCCTCAAGGAGACGCCATTTTTATGAAGTGGATACTGCATGATTGGAGCGACAAACAGTGCTTGAAGTTGTTGAAGAATTGCCACAAAGCAATTCCTGAGAATGGAATAGTGATTGTAGTGGAAGCAGTTATTCCCATAGAGCCAAACACTTCAACTTCTGTGAAGGTTGCTTTTCAAGCGGACATCCTCATGATGACCCAAAACCCAGGAGGCATAGAGAGGACTCAACATGAGTTCATTCACATGGCTTCACAAGCTGGGTTTAGTGGGGTAAGATTCGTCACCAATGTTTGTGGCTTATGGGTCATAGAGTTTTACAAATAG 1056 0.4811 MREDGDSLVYAMQLSNSTVLPMALQVAFELGVFDAMAGASEGARLSAKEIAALVCCENPEAPAMLDRVLRLLASHSVVDCRVEEDEEGSKQRMYGLSPVSKYFVTDVNGISLGPALALTNDKVFMESWRELKGAIKEGGIAFNRVHGMHAFEYPRLDQRFNDVFNKAMHNITALIMNTILKSYSGFVQFNKIVDVGGGLGVNLSLITSKYPHVQGINFDLPHVLKYAPNYPGVQHMGGDMFESVPQGDAIFMKWILHDWSDKQCLKLLKNCHKAIPENGIVIVVEAVIPIEPNTSTSVKVAFQADILMMTQNPGGIERTQHEFIHMASQAGFSGVRFVTNVCGLWVIEFYK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1229 351 Gene3D Vaccinia Virus protein VP39 105 351 IPR029063 -
Bisa10g1229 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 12 351 IPR016461 GO:0008168
Bisa10g1229 351 FunFam Caffeic acid 3-O-methyltransferase 1 103 - -
Bisa10g1229 351 CDD AdoMet_MTases 191 284 - -
Bisa10g1229 351 PIRSF O-mtase 2 351 IPR016461 GO:0008168
Bisa10g1229 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 350 IPR029063 -
Bisa10g1229 351 FunFam Caffeic acid O-methyltransferase 104 351 - -
Bisa10g1229 351 Pfam Dimerisation domain 22 73 IPR012967 GO:0046983
Bisa10g1229 351 PANTHER O-METHYLTRANSFERASE 12 349 IPR016461 GO:0008168
Bisa10g1229 351 Pfam O-methyltransferase domain 128 333 IPR001077 GO:0008171
Bisa10g1229 351 SUPERFAMILY "Winged helix" DNA-binding domain 5 106 IPR036390 -
Bisa10g1229 351 Gene3D - 1 103 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1229 Bisa-ChrBisa10 31058408 31085674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1229 4 351 Monolignol Biosynthesis Gene Families AT5G54160 49.138 5.04e-129 372