Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1214 ATGGCCACAACAGGTGAAGGTGGGAATGTAAAGCCAGCAATTGGAGATGGGGTCGAAGGCAAAGGACTGGTTCATCTTGGAGGAGATGTTGTGGATTTCATAGAGGAAGAACCATGGCTAGTTATGGTGGGAATGGTCATGGGTGATGGAGGAGAAGATCCAATGGCCACAAAGAGAAAAGTAAAAGATCTGGATCCTATGCAGATCCTTGCACATGGGGTTTGGGACGGCGGCAAAGGCAAGGGAGAAGTTATGGGGGTGGGAGGAAATTTCTGGGATTTGCTAAAGCCCTATGCGCGTGCCGAAGGTTTCGATTTCTTAAGAAACAAGCGAGTTGCTGTGGACCTTTCCTTCTGGATTGTCCAGCATGAGAATGCGATTAAAGCCCATGCTCGGAAACCTCACATTCGGCTTACCTTCTTCCGCACCATCAATCTTTTCTCCAAGTTTGGAGCTTTTCCAGTCTTCATTGTTGATGGGACCCCATCGTTGTTAAAATCACACGCCAGGATTACAAGATTTTTCCGTTCTGCTGGCACTGAGCTAACTAGCTTGCCTGTGGCTGAAGAAGGTGTTTCAGTTGAGAGGAATCGTGCATTTTCAAGATGTGTTAAAGAGTGTGTGGAAGTTGTGGAGCTACTTGGAATGCCTGTACTAAATGCTAAAGGAGAGGCAGAAGCACTCTGTGCCCAATTAAATAGTGAAGGTCATGTAGATGCTTGCATCACAGCTGACAGTGATGCATTCCTCTTTGGTGCAAAGTGCATTATAAAAAGCTTCTGCACCAATTCCAGAGAACCGTTTGAATGCTACAATATGTCTGATATTGAAGCTGGTCTTGGATTGAAGAGGAAACACTTAATAGCTATCTCTCTTCTTGTTGGAAATGATCATGATTTAAAAGGTGTTCAAGGGATTGGGCTTGATACAGCTCTTCGTTTTGTTAGATCTTTTAGTGAAGATGATGTACTGAATAGGTTACATGAGATAAGCAATGGGAAAGTTTTACCAGTTCCCACCAGCATTAAATCTGCAGACAATTGTGCTGACATGGATGGGAACTCTCCAAGCCGAAAACAACTTCACTGTTCCTTCTGTGGGCATCCAGGCAGCAGAAGAGATCATATGAAATTTTCCTGTGAATATTGCATTTCAAATGATGATGAAGGTTGCTCGAGAAAACCTGAGGGTTTTAATTGTGGATGCTCCTCCTGTGATATGATTAGGAAACAAAAGGGGCAGAAAAGGTTGGAAAATTGGTACACAAAAATTTGTCACAAGATTGCAGAGGAGCCAAAATTTCCCAAAGATGAAATTATTGAAATGTATTTATGCAATCACAATGGTTTTTATTCTGCAAATGATGGTCCTTGCATCTCGTGGGGAAGACCCAAGATTGAGATGCTGATAGACATTTTAAGCTTCCATCAGCACTGGGATCCATGTTACATTCAACGGCAGATTTTTCCCATGATGTCTACCATCTTTTTGAGAGATATGGCTAATAATCGCGTAGAAAGTTTGTTATTTGGGAAATATGAATTTGATTTAATAAAACGTGTGAAGATAAGATATGGATATCAATTTTATGTTGTCAAGTGGAAATGTGTGGTGGGCAATATTACCTGTACAACTCCATCACATGAATCTGGCATGCAACAAGATGATGGTTGTGAGCTTGATGAAGCTGTGGATCTACTGAATGACTCTGATGTTCCTGAGATTCATGTGGGTGATGGATTTAGCTTTCTATTGACAGATGAAAATATGGAGCTTGTGAGTGCTGCTTTTCCAGCAGAAGTTGAAAGGTTTTGGCAGGAACAGGAACTGAAGCAATTAAAAAAAAGAAAGTATTCAACCCCAAGATCTCAAGACAATGAAAATTCATCTTCATTAAACTCAAGAAGTATTCAGTTAAACATTACAGAGTTCTACCGTTCAACCAAAATGCAAAATTGCTCAAAACGGGAAGAGCTATCTGAGAACTCTGATATCCATATTGGTGGGACCTTAAAGGGCAAAAGAGAAGCATCAAGCCCAAATCTTCCAAAATCTGTGAGGCGTCGCCTTTTATTCAACTAG 2082 0.4135 MATTGEGGNVKPAIGDGVEGKGLVHLGGDVVDFIEEEPWLVMVGMVMGDGGEDPMATKRKVKDLDPMQILAHGVWDGGKGKGEVMGVGGNFWDLLKPYARAEGFDFLRNKRVAVDLSFWIVQHENAIKAHARKPHIRLTFFRTINLFSKFGAFPVFIVDGTPSLLKSHARITRFFRSAGTELTSLPVAEEGVSVERNRAFSRCVKECVEVVELLGMPVLNAKGEAEALCAQLNSEGHVDACITADSDAFLFGAKCIIKSFCTNSREPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLKGVQGIGLDTALRFVRSFSEDDVLNRLHEISNGKVLPVPTSIKSADNCADMDGNSPSRKQLHCSFCGHPGSRRDHMKFSCEYCISNDDEGCSRKPEGFNCGCSSCDMIRKQKGQKRLENWYTKICHKIAEEPKFPKDEIIEMYLCNHNGFYSANDGPCISWGRPKIEMLIDILSFHQHWDPCYIQRQIFPMMSTIFLRDMANNRVESLLFGKYEFDLIKRVKIRYGYQFYVVKWKCVVGNITCTTPSHESGMQQDDGCELDEAVDLLNDSDVPEIHVGDGFSFLLTDENMELVSAAFPAEVERFWQEQELKQLKKRKYSTPRSQDNENSSSLNSRSIQLNITEFYRSTKMQNCSKREELSENSDIHIGGTLKGKREASSPNLPKSVRRRLLFN 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1214 693 SMART xpgineu 212 282 IPR006086 GO:0004518
Bisa10g1214 693 CDD PIN_GEN1 86 286 - -
Bisa10g1214 693 Pfam XPG N-terminal domain 85 174 IPR006085 GO:0004518
Bisa10g1214 693 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 85 631 IPR006084 -
Bisa10g1214 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 109 123 IPR006084 -
Bisa10g1214 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 211 228 IPR006084 -
Bisa10g1214 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 154 173 IPR006084 -
Bisa10g1214 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 232 252 IPR006084 -
Bisa10g1214 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 287 302 IPR006084 -
Bisa10g1214 693 MobiDBLite consensus disorder prediction 652 671 - -
Bisa10g1214 693 Gene3D - 87 281 - -
Bisa10g1214 693 FunFam Flap endonuclease GEN-like 1 282 337 - -
Bisa10g1214 693 SUPERFAMILY PIN domain-like 90 297 IPR029060 -
Bisa10g1214 693 Gene3D - 282 344 - -
Bisa10g1214 693 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 282 498 IPR036279 -
Bisa10g1214 693 Pfam XPG I-region 215 297 IPR006086 GO:0004518
Bisa10g1214 693 SMART xpgn3 85 180 IPR006085 GO:0004518
Bisa10g1214 693 FunFam Flap endonuclease GEN-like 1 86 281 - -
Bisa10g1214 693 MobiDBLite consensus disorder prediction 652 685 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1214 100 316 Core DNA Replication Machinery Family AT5G26680 27.119 3.90e-16 79.3