Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1208 ATGGCTCCTTCCTTGAAGTCCGAGTCGAAGGTCGTCGTCAATGGCGAACCAGAGTACCTGAAGCAAGCGCATGCGGGGAACGTGCAGGAGGACGGAGACAGCTTCATCTACGCCATACAAATAATGAACTCCACCATCTTGTCCTTGTCTCTGCAAACCGCCTTTGAGCTCGGCGTGTTCGACGCGATGGCCGGAGCCGGCGAAGGCGCGAGGCTCTCGGCAAAGGAGATAGCGGCGCTGGTTGGTTGCGAGAACCCAGAGGCGCCGGCTATGCTGGATCGGGTTCTGAGGCTGTTGGCTAGCCACTCTCTGGTGGATTGCAGAGTGGAGGAGGATGAAGAAGGGTCGAAACAGAGGATGTACGGTCTGTCCCCTGTTTCTAAGTACTTCGTCACTGATGATCAGGGTGTTTCTCTCGGACCTCTCTTGGCCATTCTTCACGACAAGGTCTTCATGGAAAGCTGGAGGGAGCTGAAAGGCGCAATAAAGGAAGGAGGGATAGCATTCAACAGAGTGCATGGGATGCATTCGTTTGAGTATCCCAAATTCGACCAAAGGTTCAATGACATCTTCAACAAGGGAATGCACAACACCACCACCGTCATCATGAACCAAATTCTCAACTCCTACAATGGCTTTGAGAAGTTCAACAAGATTGTGGATGTTGGAGGTGGTCTTGGGGTCAACCTTCATTTGATCACTTCTAAGTACCCTCATGTTCATGGCATCAGTTTTGATCTTCCTCATGTGGTACAGCATGCCCCTGGGTATCTAGGTGTGGAACATGTGGGTGGCGATATGTTTGAAAGTGTTCCCCAGGGAGATGCCATTTTTATGAAGTGGATACTGCATGATTGGAGCGACCAACACTGCTTGAAGTTGTTGAAGAACTGCCACAAAGCAGTTCCTGAGAAAGGAATAGTGATTGTAGTTGAAACAATTCTTCCCATAGAGCCAAACACTTCAGTTTCTGTGAAGGCTGCTTGTCAAGCTGATGTCCTCATGATGACCCAAAACCCAGGAGGCAAAGAGAGGACTCAACATGAGTTCATTCACTTGGCTTCACAAGCTGGGTTTAGTGGAGTTAGATTCGTCACCAAGGTTTGTGGCTTGTGGGTTATGGAGTTTTACAAGTAG 1137 0.4952 MAPSLKSESKVVVNGEPEYLKQAHAGNVQEDGDSFIYAIQIMNSTILSLSLQTAFELGVFDAMAGAGEGARLSAKEIAALVGCENPEAPAMLDRVLRLLASHSLVDCRVEEDEEGSKQRMYGLSPVSKYFVTDDQGVSLGPLLAILHDKVFMESWRELKGAIKEGGIAFNRVHGMHSFEYPKFDQRFNDIFNKGMHNTTTVIMNQILNSYNGFEKFNKIVDVGGGLGVNLHLITSKYPHVHGISFDLPHVVQHAPGYLGVEHVGGDMFESVPQGDAIFMKWILHDWSDQHCLKLLKNCHKAVPEKGIVIVVETILPIEPNTSVSVKAACQADVLMMTQNPGGKERTQHEFIHLASQAGFSGVRFVTKVCGLWVMEFYK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1208 378 FunFam Caffeic acid 3-O-methyltransferase 18 130 - -
Bisa10g1208 378 FunFam Caffeic acid O-methyltransferase 131 378 - -
Bisa10g1208 378 Pfam O-methyltransferase domain 155 360 IPR001077 GO:0008171
Bisa10g1208 378 Gene3D Vaccinia Virus protein VP39 131 378 IPR029063 -
Bisa10g1208 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 376 IPR029063 -
Bisa10g1208 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 39 378 IPR016461 GO:0008168
Bisa10g1208 378 SUPERFAMILY "Winged helix" DNA-binding domain 31 133 IPR036390 -
Bisa10g1208 378 Gene3D - 19 130 IPR036388 -
Bisa10g1208 378 PANTHER O-METHYLTRANSFERASE 42 376 IPR016461 GO:0008168
Bisa10g1208 378 PIRSF O-mtase 18 378 IPR016461 GO:0008168
Bisa10g1208 378 Pfam Dimerisation domain 50 100 IPR012967 GO:0046983
Bisa10g1208 378 CDD AdoMet_MTases 218 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1208 Bisa-ChrBisa10 30452567 30456965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1208 31 378 Monolignol Biosynthesis Gene Families AT5G54160 49.138 2.57e-129 374