Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1194 ATGAGAGCTTCACTTTGCGCAGCCTCCATTAGAAGGCTCGATGTGGGTGTGGGTCACAATCTATCCCTAGTTCTCTACCAAGAACCAACCTTCGTGGTTGAAAAAGTAAAGTTGGATATTTTTTTCTTGATTTACCAACAAACCCTCGGAGAGGATGATATTTACATCGCTATGCCTCTCATTTCAAGGCTTTGGTTTTCTGATTCAACAACAACAACAACAACCACAACCATGGTGGTTGCAGATAACAACAATGATCGTTCAACAGAACAGTGGTTGTTTCAAGCACAAGATCTTGTCCCTCTTGCTCTGGATAAGGCTAAAGAGGTGAAGAATTTCCCAGGAAGATGGAAGATGATCATCTCAAAGCTAGAACAGATCCCATCTCGCTTATCAGACCTATCAAGCCACCCCTGCTTCTCCAAGAACGCTTTATGTAAGGAACAATTGCAGGCTGTGTCATCCACACTCAGGGAAGCCATTGATTTGGCTGAGCTTTGCATGAAGGAGAAGTATGAGGGAAAGCTTCGGATGCAGAGCGATCTTGACGCCTTGTTGGGAAAACTTGATCTGAACCTGAAAGATTGCAGCTTGTTGATCAAAACTGGTGTTCTTGGTGAAGCCACTCTGCCTCTAGCAGCCATGGCAGAACCGGATTTTTCAAGTAACGTAAGGGAGTTGCTTGCCCGCCTGCAAATTGGGCACCTGGAGGCGAAACACAAGGCCGTAGAGAGACTAGAAGAGTTGATGAAGGAAGATGAAAAGAGTGTTTCAGCTGTTTTGACTCGCAGCAATATATCTGCTTTGGTTCAACTGTTGACGGCTACATCTTTAAAAATCAGAGAGAAGACTGTTAGTATTATATGTTCTCTTGCTGAATCAGGAAGCTGTGAGAATTGGTTCGTTTCTGAAGGCGTTATTCCTCCTCTTATAAGGCTCATTGAATCAGGAAGTGTAATTGGGAAGGAGAAGGCTGCTATTTCCTTTCAGAGGCTGTCAATGTCATCAGAAACAGCTCGAGCAATCGTGGGACATGGCGGGGTTAGGCCGCTTATTGAGCTATGTCAAACTGGTGACTCAGTGTCCCAGGCTGCTTGTGCTTGCACTTTGAAGAACATATCAGCTGTGCCTGAGGTTCGACAAGTTCTAGCCGAGGAAGGGATTGTGAAGGTAATGATAAGTCTTTTAAATTGTGGGATTTTGCTGAATTCCAAAGAGTATGCTGCTGAGTGCCTACAGAATCTGACTTCAAGCAATGAGAATCTAAGAAGACTTGTGATACAAGAAAACGGAATCAGAAGCCTTTTGGCTTATCTAGATGGTCCACTTCCCCAGGAATCTTCTGTGGGAGCATTGAGGAATCTAGTAGGCTCTGTGTGTGAGCAGACTCTTGTTTCTCTAGGCCTCCTTCCTCGATTGGCTCACGCACTTAAATGCGGCTCTCCCGGGGCCCAGCAGGCGGCTGCTTCTGCAATCTGCAAAATCTGCAGCTCAGGAGACATGAAGAAGCTTGTTGGTGAAGCTGGGTGCATCCCTCTCCTTGTGAAATTACTCGAGGCTAAGTCGAATGGTGCTCGAGAGGTCACTGCACAGGCGATTTCGAGCTTGATGACACTGTCTCAGAATCAAAGAGAGGTCAAGAAGAATGACAAGAGTGTGCCTAATCTGGTTCAGTTGCTTGATCCAAGCCCTCAGAACACTGCAAAGAAGTATGCTGTTTTGTGCCTCGGATCGCTTTCTTCAAGCCAAAAGTGCAGGAGGTTGATGATCTCTTATGGGGCTATAGGGTACCTGAAGAAGCTCACGGAGATGGAGGTTCCAGGGGCAAAGAAGCTTCTTGAGAGACTGGAAAGAGGCAGATTGAGAAGCTTGTTTAGTAGGAAATAG 1887 0.4589 MRASLCAASIRRLDVGVGHNLSLVLYQEPTFVVEKVKLDIFFLIYQQTLGEDDIYIAMPLISRLWFSDSTTTTTTTTMVVADNNNDRSTEQWLFQAQDLVPLALDKAKEVKNFPGRWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSSTLREAIDLAELCMKEKYEGKLRMQSDLDALLGKLDLNLKDCSLLIKTGVLGEATLPLAAMAEPDFSSNVRELLARLQIGHLEAKHKAVERLEELMKEDEKSVSAVLTRSNISALVQLLTATSLKIREKTVSIICSLAESGSCENWFVSEGVIPPLIRLIESGSVIGKEKAAISFQRLSMSSETARAIVGHGGVRPLIELCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGILLNSKEYAAECLQNLTSSNENLRRLVIQENGIRSLLAYLDGPLPQESSVGALRNLVGSVCEQTLVSLGLLPRLAHALKCGSPGAQQAAASAICKICSSGDMKKLVGEAGCIPLLVKLLEAKSNGAREVTAQAISSLMTLSQNQREVKKNDKSVPNLVQLLDPSPQNTAKKYAVLCLGSLSSSQKCRRLMISYGAIGYLKKLTEMEVPGAKKLLERLERGRLRSLFSRK 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1194 628 Gene3D - 220 402 IPR011989 -
Bisa10g1194 628 SMART arm_5 418 457 IPR000225 GO:0005515
Bisa10g1194 628 SMART arm_5 376 417 IPR000225 GO:0005515
Bisa10g1194 628 SMART arm_5 253 293 IPR000225 GO:0005515
Bisa10g1194 628 SMART arm_5 335 375 IPR000225 GO:0005515
Bisa10g1194 628 SMART arm_5 498 538 IPR000225 GO:0005515
Bisa10g1194 628 SMART arm_5 458 497 IPR000225 GO:0005515
Bisa10g1194 628 SMART arm_5 539 581 IPR000225 GO:0005515
Bisa10g1194 628 SUPERFAMILY ARM repeat 222 607 IPR016024 -
Bisa10g1194 628 Coils Coil 236 256 - -
Bisa10g1194 628 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 509 545 IPR000225 GO:0005515
Bisa10g1194 628 Gene3D - 403 616 IPR011989 -
Bisa10g1194 628 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 84 626 - -
Bisa10g1194 628 Pfam Armadillo/beta-catenin-like repeat 459 497 IPR000225 GO:0005515
Bisa10g1194 628 Pfam Armadillo/beta-catenin-like repeat 501 536 IPR000225 GO:0005515
Bisa10g1194 628 Pfam Armadillo/beta-catenin-like repeat 336 375 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1194 Bisa-ChrBisa10 29879359 29882256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1194 258 547 U-box Gene Family AT3G54790 28.383 1.69e-17 84.7