Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1178 ATGAGTTTTGGGGGTGTTCCAGATAATATTCCTGAGCACAGCAATAACGGTATCACCACCACCATCGACGAATCTTCTAGAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTACTCACTTCCACTTTCCCCAAAACCATGTTCAACTCTCCTGCTCTCTCTCTTGCCCTTCAAACGGATATAGATGGGCAAAGAGACGGGAACAGAATGTCTGAAAATTATGAACCAAATATTAACGGAAGAAGGAGCAGAGAAGAAGAGCACGAAAGCAGATCTGGCAGCGACAACATGGAAGGCGCTTCCGGCGACGATCAAGACGGGTCCGACCAACCCCCCAGGAAGAAGCGCTATCACCGACACACTCCTCAACAAATACAAGAGCTCGAATCTTTGTTCAAAGAGTGTCCTCACCCGGATGAAAAACAGAGGTTGGAACTGAGCAAAAGACTTAATTTGGAAACTAGGCAGGTGAAATTCTGGTTCCAAAATCGGAGAACTCAGATGAAGACCCAATTGGAACGCCATGAGAACACGTTGCTTAGGCAAGAGAACGACAAGCTTAGAGCGGAGAACATGTCCATTAGAGACGCCATGAGGAACCCCATTTGCTCCAACTGTGGAGGACCAGCTATACTCGGAGAAATTTCACTGGAGGAGCAGCATCTCCGGATCGATAACGCCCGGTTGAAGGACGAGCTAGACCGGGTTTGCGCGCTGGCTGGCAAGTTTCTGGGTCGGCCCATTTCTTCATTTGCCAACTCAATGGCTCCTCCACTGGCTAACTCAAGTTTAGAGCTCGGAGTAGGGACCATTGGCTACGGAGGAATCAGCAGTGTGCCTGCAACATTGCCGTTGGGTCCTGATTTGGGTGTGGGGATCTCTGGTCCTTTAGGCATGGTGACTCCTCAATCTCCTCCTCCTCCTCCTGCCAGACCAACCGGGGCGGCAGTGGGAGGCCTGGATAGATCGATGGAGAGGTCTATGTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAATTGGTGAAGATGGCTCAGAGTGATGAGCCTCTTTGGATGAGGAGCTTAGAAGGGGGAAGAGATATCATCAACCGTGAGGAGTACCTCAGAACTTTCACTCCTTGCATTGGCGTGAAACCCAGCGGCTTTGTCTCTGAGGCTTCTAGGGAGACTGGGATGGTCATCATAAACAGCTTGGTCCTCGTCGAAACTCTCATGGACTCGAATCGTTGGTCTGAGATATTTCCTTGTATGATAGCAAGAGCCTCCACCACAGAAGTGATATCCTGTGGGATAAATGGAACCAGAAACGGTGCACTTCAACTAATGCATGCTGAACTACAAGTGCTTTCGCCGTTGGTTCCGGTTCGAGAGGTGAATTTCCTGCGATTCTGTAAGCAGCACGCAGAGGGGGTGTGGGCAGTGGTGGATGTTTCCATTGATACCATCCGAGAAGCTTCCGGTGTGACTGTCAACTGCAGGAGGCTTCCTTCTGGCTGTGTGGTGCAAGACATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAACATGCAGAATATGATGAAAGCCAAGTTCATCAGCTATACAGACCCCTGTTGAGCTCGGGCATGGGCTTTGGCGCGCAACGCTGGGTCGCCACCCTCCAACGCCAATGCGAATGCCTCGCCATCTTGATGTCCTCTTCGGCTCCCTCACGTGACCATTCTGCGATAACCTCCGGCGGGCGACGGAGCATGCTGAAGCTGGCGCAGCGCATGACCAACAATTTCTGCGCCGGCGTCTGCGCCTCCACGGTGCACAAGTGGAATAAACTCAACGCCGGCAACGTCGGGGAGGACGTCCGCGTAATGACACGGAAGAGCGTTGACGATCCCGGCGAGCCGCCGGGGATTGTGCTGAGCGCCGCCACGTCGGTGTGGCTCCCGGTGTCGCCGCAGCGACTGTTCGATTTCCTCCGAGATGAACGACTACGAAGCGAGTGGGACATACTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCTAAGGGCCAAGATCATGGCAACTGCGTCTCCCTCCTTCGAGCTAGCGCTATGAATACGAACCAGAGTAGCATGCTGATATTGCAAGAGACTTGCATAGACGCGGCGGGGTCGCTTGTGGTGTACGCGCCAGTGGATATCCCCGCCATGCACTTGGTGATGAACGGTGGCGATTCGGCTTACGTGGCTTTACTGCCTTCGGGGTTTGCCATTGTGCCAGATGGCCCTGGGGCGCGTGGGTCCCAAACGCCAGTGAGAAACGTGGGCGGCGGAAGGGTGTCTGGATCGCTTCTAACTGTGGCCTTTCAAATCCTTGTGAATAGCCTTCCGACAGCGAAGCTGACGGTGGAGTCGGTGGAGACGGTGAACAATCTCATCTCGTGCACGGTTCAGAAGATAAAAGCCGCACTTCACTGTGAAAGCTGA 2451 0.5353 MSFGGVPDNIPEHSNNGITTTIDESSRMPSGAISQPRLLTSTFPKTMFNSPALSLALQTDIDGQRDGNRMSENYEPNINGRRSREEEHESRSGSDNMEGASGDDQDGSDQPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLNLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAILGEISLEEQHLRIDNARLKDELDRVCALAGKFLGRPISSFANSMAPPLANSSLELGVGTIGYGGISSVPATLPLGPDLGVGISGPLGMVTPQSPPPPPARPTGAAVGGLDRSMERSMFLELALAAMDELVKMAQSDEPLWMRSLEGGRDIINREEYLRTFTPCIGVKPSGFVSEASRETGMVIINSLVLVETLMDSNRWSEIFPCMIARASTTEVISCGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIREASGVTVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSSAPSRDHSAITSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNTNQSSMLILQETCIDAAGSLVVYAPVDIPAMHLVMNGGDSAYVALLPSGFAIVPDGPGARGSQTPVRNVGGGRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1178 816 Coils Coil 165 197 - -
Bisa10g1178 816 FunFam Homeobox-leucine zipper protein HDG1 101 187 - -
Bisa10g1178 816 MobiDBLite consensus disorder prediction 62 121 - -
Bisa10g1178 816 MobiDBLite consensus disorder prediction 1 32 - -
Bisa10g1178 816 Gene3D - 100 187 - -
Bisa10g1178 816 MobiDBLite consensus disorder prediction 12 32 - -
Bisa10g1178 816 MobiDBLite consensus disorder prediction 78 94 - -
Bisa10g1178 816 CDD START_ArGLABRA2_like 326 552 - -
Bisa10g1178 816 ProSiteProfiles 'Homeobox' domain profile. 111 171 IPR001356 GO:0003677
Bisa10g1178 816 SUPERFAMILY Bet v1-like 581 809 - -
Bisa10g1178 816 SUPERFAMILY Homeodomain-like 97 171 IPR009057 -
Bisa10g1178 816 ProSitePatterns 'Homeobox' domain signature. 146 169 IPR017970 GO:0000981|GO:0006355
Bisa10g1178 816 ProSiteProfiles START domain profile. 322 556 IPR002913 GO:0008289
Bisa10g1178 816 Pfam Homeodomain 114 169 IPR001356 GO:0003677
Bisa10g1178 816 SMART START_1 331 553 IPR002913 GO:0008289
Bisa10g1178 816 Pfam START domain 331 553 IPR002913 GO:0008289
Bisa10g1178 816 SMART HOX_1 112 175 IPR001356 GO:0003677
Bisa10g1178 816 FunFam Homeobox-leucine zipper protein GLABRA 2 331 552 - -
Bisa10g1178 816 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 110 813 IPR042160 -
Bisa10g1178 816 CDD homeodomain 113 171 IPR001356 GO:0003677
Bisa10g1178 816 SUPERFAMILY Bet v1-like 323 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1178 Bisa-ChrBisa10 29479498 29484675 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1178 48 816 Homeobox Transcription Factor Family AT3G61150 67.684 0.0 1037
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa10g1178 START 8.7e-57 CL0209