Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1173 ATGAATATGATGCGACGGCTCAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCTGGAGGGGATTCTAACACAAAGAGAGCTAAGTTTGAACAAGAAACTGAAGGGAAAGTCAATGAGGAAACAAATCCTGTTGAGAGAGGCAGCACATATATGGATCAACATGTTGGTGCATCAGAAGAAACTACTGTTGGCACATCCAATGTGTCTGTGGTGGTGGATAAAACAGAGAAATCAGGTTATGATCAGCTTCCCAAAGAATTGCATGAAATGAAAATTAGAGATGAGAAAGGCAACAACCGCCATGAAAAGGATATAGAGGCAACTGTCGTGAATGGTAATGGAGCTGAAACAGGGCAGGTAATTACAACAGCCATTGGTGGTCGAGATGGAGAACCAAAGCAGACAATCTCATACATGGCAGAACGCGTGGTTGGTACTGGGTCCTTCGGTGTTGTTTTTCAGGCTAAGTGCCTTGAAACTGGTGAAACAGTTGCAATAAAGAAGGTGTTGCAAGACAAGAGATATAAGAACAGGGAACTCCAGGTCATGCGCATGCTTGACCATCCTAATGTTATTCAACTAAAGCACTGTTTCTTTTCAACTACCGAAAAAGATGAGCTATACCTTAATCTAGTTTTGGAGTATGTATCAGAAACTGTCTACAGAGTTTCAAAGCACTATATCAGAATGCATCAACATATGCCTATCATTTATATACAACTTTATACATACCAGATATGCCGTGCATTAAATTATTTGCATCATGTGCTTGGTGTCTGTCATCGTGATATCAAACCGCAGAATTTATTGGTTAATCCTCATACTCATCAGCTTAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCCAACATATCGTATATCTGCTCACGGTATTATAGAGCACCAGAACTTATATTTGGGGCAACTGAATACACAAATGCTATTGATATGTGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTGCTAGGACAGCCAATGTTCCCCGGAGAGAGTGGAGTTGATCAGCTGGTGGAAATCATTAAGGTATTGGGGACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACTCTGAATTTAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTTTTTCACAAGAGAATGCCTTCAGAAGCTGTGGATCTTGTATCGAGGCTGCTCCAGTATTCACCAAATCTACGGTGCACTGCTCTGGAAGCATGTGCACACCCCTTCTTTAATGATCTGAGAGACCCAAATGCATGCTTGCCGAATGGGCGACCGCTACCTCCTCTGTTTGATTTTACAGCACAAGAATTGGCTGATGCACCCGCTGAGTTGCGACACCGTCTCATCCCTGAGCATGTAAGGAGTTGA 1413 0.4282 MNMMRRLKSIASGRTSISSDPGGDSNTKRAKFEQETEGKVNEETNPVERGSTYMDQHVGASEETTVGTSNVSVVVDKTEKSGYDQLPKELHEMKIRDEKGNNRHEKDIEATVVNGNGAETGQVITTAIGGRDGEPKQTISYMAERVVGTGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQVMRMLDHPNVIQLKHCFFSTTEKDELYLNLVLEYVSETVYRVSKHYIRMHQHMPIIYIQLYTYQICRALNYLHHVLGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPMFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCTALEACAHPFFNDLRDPNACLPNGRPLPPLFDFTAQELADAPAELRHRLIPEHVRS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1173 470 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 106 469 - -
Bisa10g1173 470 FunFam Glycogen synthase kinase-3 beta 125 220 - -
Bisa10g1173 470 SMART serkin_6 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1173 470 MobiDBLite consensus disorder prediction 9 25 - -
Bisa10g1173 470 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Bisa10g1173 470 MobiDBLite consensus disorder prediction 26 44 - -
Bisa10g1173 470 ProSitePatterns Protein kinases ATP-binding region signature. 147 171 IPR017441 GO:0005524
Bisa10g1173 470 FunFam Shaggy-related protein kinase kappa 221 469 - -
Bisa10g1173 470 MobiDBLite consensus disorder prediction 1 49 - -
Bisa10g1173 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Bisa10g1173 470 SUPERFAMILY Protein kinase-like (PK-like) 140 453 IPR011009 -
Bisa10g1173 470 ProSiteProfiles Protein kinase domain profile. 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1173 470 CDD STKc_GSK3 136 428 IPR039192 -
Bisa10g1173 470 Pfam Protein kinase domain 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1173 470 Gene3D Transferase(Phosphotransferase) domain 1 221 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1173 Bisa-ChrBisa10 29149357 29154640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1173 141 467 MAP Kinase Gene Family AT1G73670 36.443 8.11e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bisa10g1173 Pkinase 3.5e-66 CL0016