Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1115 ATGGCGTTTCTGAATTATTGTGTATTGATAATCGTTTTCATTTCAGCCTTATCTATCCAATGTTTAGGTTCATCCTCTGGCACTACGCTATCCCTGTCAGTAGAGAATCCAGAAGACGCTGTGAAATCAAGAAATGGGATGTTCACTGCTGGGTTTTACGCCGTTGGCGAGAACGCCTATTCCTTTGCCGTCTGGTTCACTGAACCTCATGGCGAGAACTTGACCGCGATTTGGATGGCTAACCGCCACCAACCTGTGAACGGTGTGGGCTCAACGCTTATCCTCCATGACACAGGTAATCTAGTGTTAAACGACGCCGGTTACTTGGATGTTTGGGCCACCAACACCACCTCAACCACCTCCCCACAATTAGTTCTGAACAACGATGGTAATCTTATTCTGTATGGATCCCATAATGGTGGTGGTGGTGCCACTCTGTGGGAAAGTTTTGATTATCCAACAGATACCCTTGTGCCTGGACAACAACTCACCAGATACACTAACCTCATCTCCTCCAGAAGTCAGACTAATTTCTCACCTGGTTTTTATAAGTTGCTCTTTGACGACGATAATCTTCTTCGTCTTCTCTATGATGGCCCTGATGTTTCAAGTGTTTATTGGCCAGATCCTTGGCTTGTTAGCTGGGAAGCTGAAAGGTCCTCCTACAATGCCACTCGAATAGCGTTTATCGATTCCTATGGTAATTTTAGTTCAACTGACAGTTTGACTTTCACGGCCTTAGATTATGGCCCCGTGCTTCAGAGAAGATTGACCATTGATTGTGATGGTAATGTGCGAGTGTATAGTCGATCAAACTGGAGAGAGAAATGGTATGTTTCGTGGGAGGCCAAATCTGAACCTTGTGAGATTCATGGCATCTGTGGAGCCAATAGTGTGTGTACCTATGATCCTTATTCTGGTAGAAAATGCTCTTGTCTACCAGGTTATAGGGTTAAGGATAGAAGCGACTGGTCTCTTGGGTGCGAGCCAAAATTCAATTTCTCTTGCAACTCATCTGAGTCTCGCTTTTTGTTTATACACAATGCCCAGTTCTATGGCTATGACTATGGGTTTTACCCAAATTCCACCTTTAGTCAATGTAAGGATATATGCTTGAAATCATGTCAGTGCAAAGCCTTCCAATATAACTTTGACCGGGGCAACGGTACTTATTCTTGTTACCCAAAGTTCTCGTTGCTCAATGGGTATCTTTCCCCTAATTTCCCTGGTTCAATTTACCTGAGACTCCCAAAAAATAGTTCTTATTCTTTTGAAGAATCCGTTATGAAATGTAATGATGTAAAAACTATGAAGCTTGAAAGAGTGTATGTCTTAAGACATGGCAAAGTCATAGTGAAGGAGCTTCTGTGGTTGGGGCTGGGAATTGGAGGCTTTGAAATTGTGTGCATCTTTCTGGTTTGGTGTCTGTTGATCAGGACCAAGAAAAAGCCTGGTGCAGATGGACACAACTACCATCTTATTGCAACAGGATTCAGGAATTATAGCTATAGTGAGTTGAAGGAGGCAACAAGAGGGTTCAGTGAAGAGATAGGAAGGGGTGCTGGAGGAATCGTATATAAGGGTGTGTTGTCGAATCAACGGGTTGTAGCAATCAAGAGACTCAACGAAGCTGCTAACCAAGAGGAAAGTGAGCTTTTGGCTGAGGTACACATAATTGGAAAGCTTAACCACATGAACTTGATTGACATGTGTGGTTTTTGTGCAGAGAGAAAGCACACGTTGTTGGTGTATGAATATATGGAGAATGGATCTTTGGCTGAACATCTTGTTTCTAGTAACAATTCACTTGATTGGAGAAAGAGGTATAACATTGCCTTGGGAATAGCTAAAGGTCTTGCTTATCTTCACGAAGAATGTTTGGAGTGGATTTTGCACTGTGATATAAAGCCTCAAAACATACTTTTGGATTCAAATTTTCAACCCAAGGTGGCAGATTTTGGATTATCTAAGCTGTTGAACAGGAATAACCACAACAATTCATGCTTCTCAGGGATAAGAGGAACAAGAGGTTATATGGCACCTGAGTGGGTTTTCAATTTACCAATCACATCTAAAGTAGATGTTTATAGCTATGGCATTGTTGTGTTGGAGATGATAACAAGAAAAAGCCCAAAGGACTTCCAGATGGTTGATAATGAAGACTCACGTTGTAAAAGGCTAGTAACATGGGTGAGGGAGAAAAAGAGAAGAGGAAATGAAATGACATCGTGGGTAGAACAAATAATTGATCCTGCGATTGAAGTAGGAAGTTATGACATAAATAAGATAGAGATATTGGCCACAGTGGCTTTGGATTGTGTTGAGGAAGACAGAGATGCAAGACCTACAATGAGTCAAATAGTGGAGATGCTTCAAAGTCATGATGTTGATTCTCAATGA 2400 0.4188 MAFLNYCVLIIVFISALSIQCLGSSSGTTLSLSVENPEDAVKSRNGMFTAGFYAVGENAYSFAVWFTEPHGENLTAIWMANRHQPVNGVGSTLILHDTGNLVLNDAGYLDVWATNTTSTTSPQLVLNNDGNLILYGSHNGGGGATLWESFDYPTDTLVPGQQLTRYTNLISSRSQTNFSPGFYKLLFDDDNLLRLLYDGPDVSSVYWPDPWLVSWEAERSSYNATRIAFIDSYGNFSSTDSLTFTALDYGPVLQRRLTIDCDGNVRVYSRSNWREKWYVSWEAKSEPCEIHGICGANSVCTYDPYSGRKCSCLPGYRVKDRSDWSLGCEPKFNFSCNSSESRFLFIHNAQFYGYDYGFYPNSTFSQCKDICLKSCQCKAFQYNFDRGNGTYSCYPKFSLLNGYLSPNFPGSIYLRLPKNSSYSFEESVMKCNDVKTMKLERVYVLRHGKVIVKELLWLGLGIGGFEIVCIFLVWCLLIRTKKKPGADGHNYHLIATGFRNYSYSELKEATRGFSEEIGRGAGGIVYKGVLSNQRVVAIKRLNEAANQEESELLAEVHIIGKLNHMNLIDMCGFCAERKHTLLVYEYMENGSLAEHLVSSNNSLDWRKRYNIALGIAKGLAYLHEECLEWILHCDIKPQNILLDSNFQPKVADFGLSKLLNRNNHNNSCFSGIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITRKSPKDFQMVDNEDSRCKRLVTWVREKKRRGNEMTSWVEQIIDPAIEVGSYDINKIEILATVALDCVEEDRDARPTMSQIVEMLQSHDVDSQ 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1115 799 SMART ntp_6 338 416 IPR003609 -
Bisa10g1115 799 Gene3D - 153 281 IPR036426 -
Bisa10g1115 799 SMART serkin_6 511 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1115 799 CDD PAN_AP_plant 335 417 - -
Bisa10g1115 799 ProSiteProfiles Protein kinase domain profile. 511 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1115 799 Pfam PAN-like domain 336 393 IPR003609 -
Bisa10g1115 799 CDD B_lectin 43 153 IPR001480 -
Bisa10g1115 799 Gene3D Phosphorylase Kinase; domain 1 478 586 - -
Bisa10g1115 799 Pfam Protein kinase domain 514 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1115 799 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Bisa10g1115 799 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Bisa10g1115 799 SUPERFAMILY Protein kinase-like (PK-like) 490 792 IPR011009 -
Bisa10g1115 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Bisa10g1115 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Bisa10g1115 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 210 IPR036426 -
Bisa10g1115 799 CDD STKc_IRAK 517 792 - -
Bisa10g1115 799 Gene3D - 29 152 IPR036426 -
Bisa10g1115 799 FunFam S-receptor-like serine/threonine-protein kinase 480 586 - -
Bisa10g1115 799 Pfam S-locus glycoprotein domain 238 319 IPR000858 GO:0048544
Bisa10g1115 799 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Bisa10g1115 799 SMART blect_4 31 153 IPR001480 -
Bisa10g1115 799 FunFam Serine/threonine-protein kinase 587 799 - -
Bisa10g1115 799 Pfam D-mannose binding lectin 75 166 IPR001480 -
Bisa10g1115 799 Gene3D Transferase(Phosphotransferase) domain 1 587 799 - -
Bisa10g1115 799 PANTHER OS07G0415500 PROTEIN 7 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1115 Bisa-ChrBisa10 27455175 27457574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1115 497 791 Receptor kinase-like Gene Family AT3G58690 38.944 2.34e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa10g1115 Pkinase 1.3e-55 CL0016